- BQITUIX ;PRXM/HC/KJH - Build Taxonomy Program ; 18 Jul 2006 12:46 PM
- ;;2.3;ICARE MANAGEMENT SYSTEM;**3,4**;Apr 18, 2012;Build 66
- Q
- ;
- BLDTAX(TAX,TARGET) ; PEP
- ;
- ; Takes a taxonomy name and builds an array that can then be used
- ; to scan various V-File cross-references to see which records
- ; match an entry in the Taxonomy.
- ;
- ; Currently supported Taxonomies are as follows:
- ; (where FILE is field #.15 in the TAXONOMY file #9002226)
- ; ICD9 Diagnoses via ICD9 codes (^ICD9 - FILE 80)
- ; ICD9 Procedures via ICD9 codes (^ICD0 - FILE 80.1)
- ; CPT Procedures via CPT codes (^ICPT - FILE 81)
- ; Medications via NDC codes (^PSDRUG - FILE 2)
- ; Medications via MED IEN (^PSDRUG - FILE 50)
- ; Laboratory tests via LOINC codes (^LAB(60) - FILE 95.3)
- ; Patient Education Topics by name (^AUTTEDT - FILE 9999999.09)
- ; NOTE: Use BLDTAX1 below if providing a list of partial Patient Education Topic Codes to match.
- ; Immunizations via HL7/CVX codes (^AUTTIMM - FILE 9999999.14)
- ; Health Factors by Name (^AUTTHF - FILE 9999999.64)
- ; (where FILE is field #.09 in the LAB TAXONOMY file #9002228)
- ; Laboratory tests via LAB IEN (^LAB(60) - FILE 60)
- ; VA Drug Class (^PS(50.605 - FILE 50.605)
- ; Community (^AUTTCOM - FILE 9999999.05)
- ; Clinics (^DIC(40.7 - FILE 40.7)
- ;
- ; Input:
- ; TAX = Name of Taxonomy from ATXAX or ATXLAB file.
- ; (required)
- ; TARGET = Closed array reference where the output will be stored.
- ; (required)
- ; This can be a local variable or global reference.
- ; (Ex. TARGET="ARRAY" or TARGET="^TMP($J)"
- ;
- ; Output:
- ; An array in the local or global TARGET of the form:
- ; @TARGET@(IEN)=NAME (.01 field)
- ;
- ; NOTE: Kill the output array before calling the function unless
- ; you intend to group several Taxonomies of the same type.
- ;
- N FILEREF,TAXIEN,TAXREF,ENTRY,VALUE,VAL,END,FILE,INDEX,IEN,NAME
- I TARGET=""!(TAX="") Q
- S TAXIEN=$O(^ATXAX("B",TAX,0)),TAXREF="^ATXAX"
- I TAXIEN="" S TAXIEN=$O(^ATXLAB("B",TAX,0)),TAXREF="^ATXLAB"
- I TAXIEN="" Q
- I TAXREF="^ATXAX" S FILEREF=$$GET1^DIQ(9002226,TAXIEN,.15,"I")
- I TAXREF="^ATXLAB" S FILEREF=$$GET1^DIQ(9002228,TAXIEN,.09,"I")
- I FILEREF="",TAX[" NDC" S FILEREF=50.67
- ; The following file references from Taxonomy are supported:
- I $F(",40.7,80,80.1,81,2,50,95.3,9999999.09,9999999.14,9999999.64,60,50.605,9999999.05,50.67,",","_FILEREF_",")=0 Q
- S ENTRY=0
- F S ENTRY=$O(@TAXREF@(TAXIEN,21,ENTRY)) Q:'ENTRY D
- .S VALUE=@TAXREF@(TAXIEN,21,ENTRY,0)
- .S VAL=$P(VALUE,U,1),END=$P(VALUE,U,2)
- .; LAB entries use the IEN and only specify one value.
- .I FILEREF=60 D Q
- ..S NAME=$P($G(^LAB(60,VAL,0)),U,1),@TARGET@(VAL)=NAME
- .; MED entries use the IEN and only specify one value.
- .I FILEREF=50.605 D Q
- ..NEW X,NVAL
- ..S NVAL=$O(^PS(50.605,"B",VAL,"")) Q:NVAL=""
- ..S X="" F S X=$O(^PSDRUG("VAC",NVAL,X)) Q:X="" D
- ...S NAME=$P($G(^PSDRUG(X,0)),U,1),@TARGET@(X)=NAME
- .I FILEREF=50 D Q
- ..S NAME=$P($G(^PSDRUG(VAL,0)),U,1),@TARGET@(VAL)=NAME
- .I FILEREF=40.7 D Q
- ..S NAME=$P($G(^DIC(40.7,VAL,0)),U,1),@TARGET@(VAL)=NAME
- .; Otherwise, treat all items as ranges (even if there is only one entry).
- .I END="" S END=VAL
- .D
- ..I FILEREF=95.3 D Q
- ...; The LOINC x-ref in LAB does not use the check digit (piece 2).
- ...S VAL=$P(VAL,"-"),END=$P(END,"-")
- ...S FILE="^LAB(60)",INDEX="AF"
- ..I FILEREF=50.67 S FILE="^PSDRUG",INDEX="D" Q
- ..I FILEREF=9999999.05 S FILE="^AUTTCOM",INDEX="B" Q
- ..I FILEREF=9999999.09 S FILE="^AUTTEDT",INDEX="B" Q
- ..I FILEREF=9999999.14 S FILE="^AUTTIMM",INDEX="C" Q
- ..I FILEREF=9999999.64 S FILE="^AUTTHF",INDEX="B" Q
- ..; CPT, ICD9, and ICD0 require a SPACE be added to the code.
- ..; Some Taxonomy entries already have the space included.
- ..S:$E(VAL,$L(VAL))'=" " VAL=VAL_" "
- ..S:$E(END,$L(END))'=" " END=END_" "
- ..I FILEREF=80 S FILE="^ICD9",INDEX="BA" Q
- ..I FILEREF=80.1 S FILE="^ICD0",INDEX="BA" Q
- ..I FILEREF=81 S FILE="^ICPT",INDEX="BA" Q
- . I VAL?.N,FILEREF=9999999.09 S NAME=$P(@FILE@(VAL,0),U,1),@TARGET@(VAL)=NAME Q
- .; Backup one entry so loop can find all the entries in the range.
- .S VAL=$O(@FILE@(INDEX,VAL),-1)
- .F S VAL=$O(@FILE@(INDEX,VAL)) Q:VAL="" Q:$$CHECK(VAL,END) D
- ..S IEN=""
- ..F S IEN=$O(@FILE@(INDEX,VAL,IEN)) Q:IEN="" D
- ...S NAME=$P($G(@FILE@(IEN,0)),U,1)
- ...S @TARGET@(IEN)=NAME
- Q
- ;
- CHECK(V,E) ;
- N Z
- I V=E Q 0
- S Z(V)=""
- S Z(E)=""
- I $O(Z(""))=E Q 1
- Q 0
- ;
- BLDTAX1(TAX,TARGET) ;EP
- ;
- ; Takes a list of partial Patient Education topic names and
- ; builds an array that can then be used to scan a V-File
- ; cross-reference to see which records match an entry in the
- ; list.
- ;
- ; This tag only supports Patient Education:
- ; (where FILE is field #.15 in the TAXONOMY file #9002226)
- ; Patient Education Topic Codes (^AUTTEDT - FILE 9999999.09)
- ;
- ; Input:
- ; TAX = PATIENT EDUCATION TOPIC CODE LIST to search for
- ; (required)
- ;
- ; Example: "CD-,-CD,AOD-,-AOD"
- ; Example: "*BGP HIV/AIDS DXS"
- ;
- ; Returns items where the MNEMONIC field for the Patient
- ; Education entry contains one of the listed values.
- ;
- ; Second example shows an ICD taxonomy name.
- ; If used, will search for any Patient Education entry
- ; containing one of the values in that Taxonomy.
- ;
- ; TARGET : Closed array reference where the output will be stored.
- ; This can be a local variable or global reference.
- ; (Ex. TARGET="ARRAY" or TARGET="^TMP($J)"
- ;
- ; Output:
- ; An array in the local or global TARGET of the form:
- ; @TARGET@(IEN)=NAME (.01 field)
- ;
- ; NOTE: Kill the output array before calling the function unless
- ; you intend to group several Taxonomies of the same type.
- ;
- N VAL,IEN,NAME,MNEMONIC,TAX1,I,ICDIEN,FLG
- F I=1:1:$L(TAX,",") S TAX1=$P(TAX,",",I) I $E(TAX1)="*" D BLDTAX($E(TAX1,2,$L(TAX1)),"ICDIEN")
- S VAL=""
- F S VAL=$O(^AUTTEDT("B",VAL)) Q:VAL="" D
- .S IEN=""
- .F S IEN=$O(^AUTTEDT("B",VAL,IEN)) Q:IEN="" D
- ..S NAME=$$GET1^DIQ(9999999.09,IEN,.01,"I"),MNEMONIC=$$GET1^DIQ(9999999.09,IEN,1,"I"),FLG=0
- ..F I=1:1:$L(TAX,",") S TAX1=$P(TAX,",",I) I $E(TAX1)'="*",MNEMONIC[TAX1 S @TARGET@(IEN)=NAME_U_MNEMONIC,FLG=1 Q
- ..I FLG=1 Q
- ..S I=""
- ..;If an ICD is used as the MNEMONIC it will be formatted as "ICD-abbreviation".
- ..;For example, if the ICD is "042." and the patient education is 'alcohol or drugs' then the MNEMONIC would be "042.-AOD".
- ..F S I=$O(ICDIEN(I)) Q:I="" S TAX1=ICDIEN(I)_"-" I MNEMONIC[TAX1 S @TARGET@(IEN)=NAME_U_MNEMONIC,FLG=1 Q
- ..I FLG=1 Q
- ..Q
- .Q
- Q
- BQITUIX ;PRXM/HC/KJH - Build Taxonomy Program ; 18 Jul 2006 12:46 PM
- +1 ;;2.3;ICARE MANAGEMENT SYSTEM;**3,4**;Apr 18, 2012;Build 66
- +2 QUIT
- +3 ;
- BLDTAX(TAX,TARGET) ; PEP
- +1 ;
- +2 ; Takes a taxonomy name and builds an array that can then be used
- +3 ; to scan various V-File cross-references to see which records
- +4 ; match an entry in the Taxonomy.
- +5 ;
- +6 ; Currently supported Taxonomies are as follows:
- +7 ; (where FILE is field #.15 in the TAXONOMY file #9002226)
- +8 ; ICD9 Diagnoses via ICD9 codes (^ICD9 - FILE 80)
- +9 ; ICD9 Procedures via ICD9 codes (^ICD0 - FILE 80.1)
- +10 ; CPT Procedures via CPT codes (^ICPT - FILE 81)
- +11 ; Medications via NDC codes (^PSDRUG - FILE 2)
- +12 ; Medications via MED IEN (^PSDRUG - FILE 50)
- +13 ; Laboratory tests via LOINC codes (^LAB(60) - FILE 95.3)
- +14 ; Patient Education Topics by name (^AUTTEDT - FILE 9999999.09)
- +15 ; NOTE: Use BLDTAX1 below if providing a list of partial Patient Education Topic Codes to match.
- +16 ; Immunizations via HL7/CVX codes (^AUTTIMM - FILE 9999999.14)
- +17 ; Health Factors by Name (^AUTTHF - FILE 9999999.64)
- +18 ; (where FILE is field #.09 in the LAB TAXONOMY file #9002228)
- +19 ; Laboratory tests via LAB IEN (^LAB(60) - FILE 60)
- +20 ; VA Drug Class (^PS(50.605 - FILE 50.605)
- +21 ; Community (^AUTTCOM - FILE 9999999.05)
- +22 ; Clinics (^DIC(40.7 - FILE 40.7)
- +23 ;
- +24 ; Input:
- +25 ; TAX = Name of Taxonomy from ATXAX or ATXLAB file.
- +26 ; (required)
- +27 ; TARGET = Closed array reference where the output will be stored.
- +28 ; (required)
- +29 ; This can be a local variable or global reference.
- +30 ; (Ex. TARGET="ARRAY" or TARGET="^TMP($J)"
- +31 ;
- +32 ; Output:
- +33 ; An array in the local or global TARGET of the form:
- +34 ; @TARGET@(IEN)=NAME (.01 field)
- +35 ;
- +36 ; NOTE: Kill the output array before calling the function unless
- +37 ; you intend to group several Taxonomies of the same type.
- +38 ;
- +39 NEW FILEREF,TAXIEN,TAXREF,ENTRY,VALUE,VAL,END,FILE,INDEX,IEN,NAME
- +40 IF TARGET=""!(TAX="")
- QUIT
- +41 SET TAXIEN=$ORDER(^ATXAX("B",TAX,0))
- SET TAXREF="^ATXAX"
- +42 IF TAXIEN=""
- SET TAXIEN=$ORDER(^ATXLAB("B",TAX,0))
- SET TAXREF="^ATXLAB"
- +43 IF TAXIEN=""
- QUIT
- +44 IF TAXREF="^ATXAX"
- SET FILEREF=$$GET1^DIQ(9002226,TAXIEN,.15,"I")
- +45 IF TAXREF="^ATXLAB"
- SET FILEREF=$$GET1^DIQ(9002228,TAXIEN,.09,"I")
- +46 IF FILEREF=""
- IF TAX[" NDC"
- SET FILEREF=50.67
- +47 ; The following file references from Taxonomy are supported:
- +48 IF $FIND(",40.7,80,80.1,81,2,50,95.3,9999999.09,9999999.14,9999999.64,60,50.605,9999999.05,50.67,",","_FILEREF_",")=0
- QUIT
- +49 SET ENTRY=0
- +50 FOR
- SET ENTRY=$ORDER(@TAXREF@(TAXIEN,21,ENTRY))
- IF 'ENTRY
- QUIT
- Begin DoDot:1
- +51 SET VALUE=@TAXREF@(TAXIEN,21,ENTRY,0)
- +52 SET VAL=$PIECE(VALUE,U,1)
- SET END=$PIECE(VALUE,U,2)
- +53 ; LAB entries use the IEN and only specify one value.
- +54 IF FILEREF=60
- Begin DoDot:2
- +55 SET NAME=$PIECE($GET(^LAB(60,VAL,0)),U,1)
- SET @TARGET@(VAL)=NAME
- End DoDot:2
- QUIT
- +56 ; MED entries use the IEN and only specify one value.
- +57 IF FILEREF=50.605
- Begin DoDot:2
- +58 NEW X,NVAL
- +59 SET NVAL=$ORDER(^PS(50.605,"B",VAL,""))
- IF NVAL=""
- QUIT
- +60 SET X=""
- FOR
- SET X=$ORDER(^PSDRUG("VAC",NVAL,X))
- IF X=""
- QUIT
- Begin DoDot:3
- +61 SET NAME=$PIECE($GET(^PSDRUG(X,0)),U,1)
- SET @TARGET@(X)=NAME
- End DoDot:3
- End DoDot:2
- QUIT
- +62 IF FILEREF=50
- Begin DoDot:2
- +63 SET NAME=$PIECE($GET(^PSDRUG(VAL,0)),U,1)
- SET @TARGET@(VAL)=NAME
- End DoDot:2
- QUIT
- +64 IF FILEREF=40.7
- Begin DoDot:2
- +65 SET NAME=$PIECE($GET(^DIC(40.7,VAL,0)),U,1)
- SET @TARGET@(VAL)=NAME
- End DoDot:2
- QUIT
- +66 ; Otherwise, treat all items as ranges (even if there is only one entry).
- +67 IF END=""
- SET END=VAL
- +68 Begin DoDot:2
- +69 IF FILEREF=95.3
- Begin DoDot:3
- +70 ; The LOINC x-ref in LAB does not use the check digit (piece 2).
- +71 SET VAL=$PIECE(VAL,"-")
- SET END=$PIECE(END,"-")
- +72 SET FILE="^LAB(60)"
- SET INDEX="AF"
- End DoDot:3
- QUIT
- +73 IF FILEREF=50.67
- SET FILE="^PSDRUG"
- SET INDEX="D"
- QUIT
- +74 IF FILEREF=9999999.05
- SET FILE="^AUTTCOM"
- SET INDEX="B"
- QUIT
- +75 IF FILEREF=9999999.09
- SET FILE="^AUTTEDT"
- SET INDEX="B"
- QUIT
- +76 IF FILEREF=9999999.14
- SET FILE="^AUTTIMM"
- SET INDEX="C"
- QUIT
- +77 IF FILEREF=9999999.64
- SET FILE="^AUTTHF"
- SET INDEX="B"
- QUIT
- +78 ; CPT, ICD9, and ICD0 require a SPACE be added to the code.
- +79 ; Some Taxonomy entries already have the space included.
- +80 IF $EXTRACT(VAL,$LENGTH(VAL))'=" "
- SET VAL=VAL_" "
- +81 IF $EXTRACT(END,$LENGTH(END))'=" "
- SET END=END_" "
- +82 IF FILEREF=80
- SET FILE="^ICD9"
- SET INDEX="BA"
- QUIT
- +83 IF FILEREF=80.1
- SET FILE="^ICD0"
- SET INDEX="BA"
- QUIT
- +84 IF FILEREF=81
- SET FILE="^ICPT"
- SET INDEX="BA"
- QUIT
- End DoDot:2
- +85 IF VAL?.N
- IF FILEREF=9999999.09
- SET NAME=$PIECE(@FILE@(VAL,0),U,1)
- SET @TARGET@(VAL)=NAME
- QUIT
- +86 ; Backup one entry so loop can find all the entries in the range.
- +87 SET VAL=$ORDER(@FILE@(INDEX,VAL),-1)
- +88 FOR
- SET VAL=$ORDER(@FILE@(INDEX,VAL))
- IF VAL=""
- QUIT
- IF $$CHECK(VAL,END)
- QUIT
- Begin DoDot:2
- +89 SET IEN=""
- +90 FOR
- SET IEN=$ORDER(@FILE@(INDEX,VAL,IEN))
- IF IEN=""
- QUIT
- Begin DoDot:3
- +91 SET NAME=$PIECE($GET(@FILE@(IEN,0)),U,1)
- +92 SET @TARGET@(IEN)=NAME
- End DoDot:3
- End DoDot:2
- End DoDot:1
- +93 QUIT
- +94 ;
- CHECK(V,E) ;
- +1 NEW Z
- +2 IF V=E
- QUIT 0
- +3 SET Z(V)=""
- +4 SET Z(E)=""
- +5 IF $ORDER(Z(""))=E
- QUIT 1
- +6 QUIT 0
- +7 ;
- BLDTAX1(TAX,TARGET) ;EP
- +1 ;
- +2 ; Takes a list of partial Patient Education topic names and
- +3 ; builds an array that can then be used to scan a V-File
- +4 ; cross-reference to see which records match an entry in the
- +5 ; list.
- +6 ;
- +7 ; This tag only supports Patient Education:
- +8 ; (where FILE is field #.15 in the TAXONOMY file #9002226)
- +9 ; Patient Education Topic Codes (^AUTTEDT - FILE 9999999.09)
- +10 ;
- +11 ; Input:
- +12 ; TAX = PATIENT EDUCATION TOPIC CODE LIST to search for
- +13 ; (required)
- +14 ;
- +15 ; Example: "CD-,-CD,AOD-,-AOD"
- +16 ; Example: "*BGP HIV/AIDS DXS"
- +17 ;
- +18 ; Returns items where the MNEMONIC field for the Patient
- +19 ; Education entry contains one of the listed values.
- +20 ;
- +21 ; Second example shows an ICD taxonomy name.
- +22 ; If used, will search for any Patient Education entry
- +23 ; containing one of the values in that Taxonomy.
- +24 ;
- +25 ; TARGET : Closed array reference where the output will be stored.
- +26 ; This can be a local variable or global reference.
- +27 ; (Ex. TARGET="ARRAY" or TARGET="^TMP($J)"
- +28 ;
- +29 ; Output:
- +30 ; An array in the local or global TARGET of the form:
- +31 ; @TARGET@(IEN)=NAME (.01 field)
- +32 ;
- +33 ; NOTE: Kill the output array before calling the function unless
- +34 ; you intend to group several Taxonomies of the same type.
- +35 ;
- +36 NEW VAL,IEN,NAME,MNEMONIC,TAX1,I,ICDIEN,FLG
- +37 FOR I=1:1:$LENGTH(TAX,",")
- SET TAX1=$PIECE(TAX,",",I)
- IF $EXTRACT(TAX1)="*"
- DO BLDTAX($EXTRACT(TAX1,2,$LENGTH(TAX1)),"ICDIEN")
- +38 SET VAL=""
- +39 FOR
- SET VAL=$ORDER(^AUTTEDT("B",VAL))
- IF VAL=""
- QUIT
- Begin DoDot:1
- +40 SET IEN=""
- +41 FOR
- SET IEN=$ORDER(^AUTTEDT("B",VAL,IEN))
- IF IEN=""
- QUIT
- Begin DoDot:2
- +42 SET NAME=$$GET1^DIQ(9999999.09,IEN,.01,"I")
- SET MNEMONIC=$$GET1^DIQ(9999999.09,IEN,1,"I")
- SET FLG=0
- +43 FOR I=1:1:$LENGTH(TAX,",")
- SET TAX1=$PIECE(TAX,",",I)
- IF $EXTRACT(TAX1)'="*"
- IF MNEMONIC[TAX1
- SET @TARGET@(IEN)=NAME_U_MNEMONIC
- SET FLG=1
- QUIT
- +44 IF FLG=1
- QUIT
- +45 SET I=""
- +46 ;If an ICD is used as the MNEMONIC it will be formatted as "ICD-abbreviation".
- +47 ;For example, if the ICD is "042." and the patient education is 'alcohol or drugs' then the MNEMONIC would be "042.-AOD".
- +48 FOR
- SET I=$ORDER(ICDIEN(I))
- IF I=""
- QUIT
- SET TAX1=ICDIEN(I)_"-"
- IF MNEMONIC[TAX1
- SET @TARGET@(IEN)=NAME_U_MNEMONIC
- SET FLG=1
- QUIT
- +49 IF FLG=1
- QUIT
- +50 QUIT
- End DoDot:2
- +51 QUIT
- End DoDot:1
- +52 QUIT