- GMTSLRMX ; SLC/JER,KER - Extended Microbiology Extract ; 02/27/2002
- ;;2.7;Health Summary;**49**;Oct 20, 1995
- ;
- ; External References
- ; DBIA 10022 %XY^%RCR
- ; DBIA 526 ^LAB(61.2
- ; DBIA 63 ^LR(
- ; DBIA 2056 $$GET1^DID
- ; DBIA 10015 EN^DIQ1
- ;
- PARA ; Get Parasitology Work-up
- N DA,DIC,DIQ,DR,STATUS,PN,SN,RMK,SMEAR,COM
- I $D(^LR(LRDFN,"MI",IX,5)) D
- . S DIC=63,DA=LRDFN,DA(63.05)=IX,DR=5,DR(63.05)=15,DIQ="STATUS"
- . S DIQ(0)="E" D EN^DIQ1
- . S ^TMP("LRM",$J,"PARA",0)=$E($P(STATUS(63.05,IX,15,"E")," ",1),1,6)
- S PN=0
- F S PN=$O(^LR(LRDFN,"MI",IX,6,PN)) Q:+PN'>0 D
- . S SN=0
- . D IDPARA
- . F S SN=$O(^LR(LRDFN,"MI",IX,6,PN,1,SN)) Q:+SN'>0 D IDPARA
- ; Parasitology smear/prep
- S SMEAR=0
- F S SMEAR=$O(^LR(LRDFN,"MI",IX,24,SMEAR)) Q:SMEAR'>0 S ^TMP("LRM",$J,"PARA","SMEAR",SMEAR)=^(SMEAR,0)
- ; Remark
- S RMK=0
- F S RMK=$O(^LR(LRDFN,"MI",IX,7,RMK)) Q:+RMK'>0 S ^TMP("LRM",$J,"PARA","R",RMK)=^(RMK,0)
- Q
- IDPARA ; Get parasite stage, quantity, and comment
- N DA,DIC,DIQ,DR,PARA,STAGE
- I 'SN S PARA=+^LR(LRDFN,"MI",IX,6,PN,0),PARA=$S($D(EXPAND):PN_";"_$P(^LAB(61.2,PARA,0),U),1:$P(^LAB(61.2,PARA,0),U)),^TMP("LRM",$J,"PARA",PN)=PARA Q
- S DA=LRDFN,DA(63.05)=IX,DA(63.34)=PN,DA(63.35)=SN,DIC=63,DIQ="STAGE",DIQ(0)="E",DR=5,DR(63.05)=16,DR(63.34)=1,DR(63.35)=".01;1" D EN^DIQ1
- S ^TMP("LRM",$J,"PARA",PN,SN)=STAGE(63.35,SN,.01,"E")_U_STAGE(63.35,SN,1,"E")
- ; Comment
- S COM=0
- F S COM=$O(^LR(LRDFN,"MI",IX,6,PN,1,SN,1,COM)) Q:COM'>0 S ^TMP("LRM",$J,"PARA",PN,SN,"COM",COM)=^(COM,0)
- Q
- MYCO ; Get Mycology Work-up
- N DA,DIC,DIQ,DR,DA,STATUS,GMW,ISO,FUN,RMK,COM,SMEAR
- ; Work-up
- I $D(^LR(LRDFN,"MI",IX,8)) D
- . S DIC=63,DA=LRDFN,DA(63.05)=IX,DR=5,DR(63.05)=19,DIQ="STATUS"
- . S DIQ(0)="E" D EN^DIQ1
- . S ^TMP("LRM",$J,"MYCO",0)=$E($P(STATUS(63.05,IX,19,"E")," ",1),1,6)
- S ISO=0
- F S ISO=$O(^LR(LRDFN,"MI",IX,9,ISO)) Q:+ISO'>0 D
- . D FNGS S ^TMP("LRM",$J,"MYCO",ISO)=$S($D(EXPAND):ISO_";"_FUN,1:FUN)
- . ; Comment
- . S COM=0
- . F S COM=$O(^LR(LRDFN,"MI",IX,9,ISO,1,COM)) Q:COM'>0 S ^TMP("LRM",$J,"MYCO",ISO,"COM",COM)=^(COM,0)
- ; Mycology smear/prep
- S SMEAR=0
- F S SMEAR=$O(^LR(LRDFN,"MI",IX,15,SMEAR)) Q:SMEAR'>0 S ^TMP("LRM",$J,"MYCO","SMEAR",SMEAR)=^(SMEAR,0)
- ; Remark
- S RMK=0
- F S RMK=$O(^LR(LRDFN,"MI",IX,10,RMK)) Q:+RMK'>0 S ^TMP("LRM",$J,"MYCO","R",RMK)=^(RMK,0)
- Q
- FNGS ; Fungus/Yeast
- N QTY S FUN=+^LR(LRDFN,"MI",IX,9,ISO,0),QTY=$P(^(0),U,2)
- S FUN=$P(^LAB(61.2,FUN,0),U),FUN=FUN_U_QTY
- Q
- TB ; Gets Mycobacteriology Work-up
- N DA,DIC,DIQ,DR,STATUS,GMW,ISO,MB,RMK,X,%X,Y,%Y,COM,MY,GMTB,GMTBA,GMTBF,GMTBL
- I $D(^LR(LRDFN,"MI",IX,11)) D
- . S DIC=63,DA=LRDFN,DA(63.05)=IX,DR=5,DR(63.05)="23;24;25",DIQ="STATUS"
- . S DIQ(0)="E" D EN^DIQ1
- . ; Status, Acid Fast Stain, Quantity
- . S ^TMP("LRM",$J,"TB",0)=$E($P(STATUS(63.05,IX,23,"E")," ",1),1,6)_U_STATUS(63.05,IX,24,"E")_U_STATUS(63.05,IX,25,"E")
- S ISO=0
- F S ISO=$O(^LR(LRDFN,"MI",IX,12,ISO)) Q:+ISO'>0 D
- . D MYCB S ^TMP("LRM",$J,"TB",ISO)=$S($D(EXPAND):ISO_";"_MB,1:MB)
- . ; Comment
- . S COM=0
- . F S COM=$O(^LR(LRDFN,"MI",IX,12,ISO,1,COM)) Q:COM'>0 S ^TMP("LRM",$J,"TB",ISO,"COM",COM)=^(COM,0)
- . ; Susceptiblities
- . S GMTB=2
- . F S GMTB=$O(^LR(LRDFN,"MI",IX,12,ISO,GMTB)) Q:GMTB'["2."!(GMTB="") D
- . . K GMTBL S %X="^DD(63.39,""GL"","_+($G(GMTB))_",1",%Y="GMTBL(" D %XY^%RCR
- . . S GMTBF=+($O(GMTBL(1,0))),GMTBA=$$GET1^DID(63.39,GMTBF,"","LABEL")
- . . S ^TMP("LRM",$J,"TB",ISO,"SUSC",GMTB)=GMTBA_U_$P(^LR(LRDFN,"MI",IX,12,ISO,GMTB),U)
- ; Remark
- S RMK=0
- F S RMK=$O(^LR(LRDFN,"MI",IX,13,RMK)) Q:RMK="" S ^TMP("LRM",$J,"TB","R",RMK)=^(RMK,0)
- Q
- MYCB ; Mycobacterium
- N QTY S MB=+^LR(LRDFN,"MI",IX,12,ISO,0),QTY=$P(^(0),U,2)
- S MB=$P(^LAB(61.2,MB,0),U),MB=MB_U_QTY
- Q
- VIRO ; Gets Virology Work-up
- N BUG,DA,DIC,DIQ,DR,GMW,ISO,RMK,STATUS
- I $D(^LR(LRDFN,"MI",IX,16)) D
- . S DIC=63,DA=LRDFN,DA(63.05)=IX,DR=5,DR(63.05)=34,DIQ="STATUS"
- . S DIQ(0)="E" D EN^DIQ1
- . S ^TMP("LRM",$J,"VIRO",0)=$E($P(STATUS(63.05,IX,34,"E")," ",1),1,6)
- S ISO=0
- F S ISO=$O(^LR(LRDFN,"MI",IX,17,ISO)) Q:+ISO'>0 D
- . D PHAGE S ^TMP("LRM",$J,"VIRO",ISO)=$S($D(EXPAND):ISO_";"_BUG,1:BUG)
- S RMK=0
- F S RMK=$O(^LR(LRDFN,"MI",IX,18,RMK)) Q:RMK="" S ^TMP("LRM",$J,"VIRO","R",RMK)=^(RMK,0)
- Q
- PHAGE ; Virus
- S BUG=+^LR(LRDFN,"MI",IX,17,ISO,0),BUG=$P(^LAB(61.2,BUG,0),U)
- Q
- GMTSLRMX ; SLC/JER,KER - Extended Microbiology Extract ; 02/27/2002
- +1 ;;2.7;Health Summary;**49**;Oct 20, 1995
- +2 ;
- +3 ; External References
- +4 ; DBIA 10022 %XY^%RCR
- +5 ; DBIA 526 ^LAB(61.2
- +6 ; DBIA 63 ^LR(
- +7 ; DBIA 2056 $$GET1^DID
- +8 ; DBIA 10015 EN^DIQ1
- +9 ;
- PARA ; Get Parasitology Work-up
- +1 NEW DA,DIC,DIQ,DR,STATUS,PN,SN,RMK,SMEAR,COM
- +2 IF $DATA(^LR(LRDFN,"MI",IX,5))
- Begin DoDot:1
- +3 SET DIC=63
- SET DA=LRDFN
- SET DA(63.05)=IX
- SET DR=5
- SET DR(63.05)=15
- SET DIQ="STATUS"
- +4 SET DIQ(0)="E"
- DO EN^DIQ1
- +5 SET ^TMP("LRM",$JOB,"PARA",0)=$EXTRACT($PIECE(STATUS(63.05,IX,15,"E")," ",1),1,6)
- End DoDot:1
- +6 SET PN=0
- +7 FOR
- SET PN=$ORDER(^LR(LRDFN,"MI",IX,6,PN))
- IF +PN'>0
- QUIT
- Begin DoDot:1
- +8 SET SN=0
- +9 DO IDPARA
- +10 FOR
- SET SN=$ORDER(^LR(LRDFN,"MI",IX,6,PN,1,SN))
- IF +SN'>0
- QUIT
- DO IDPARA
- End DoDot:1
- +11 ; Parasitology smear/prep
- +12 SET SMEAR=0
- +13 FOR
- SET SMEAR=$ORDER(^LR(LRDFN,"MI",IX,24,SMEAR))
- IF SMEAR'>0
- QUIT
- SET ^TMP("LRM",$JOB,"PARA","SMEAR",SMEAR)=^(SMEAR,0)
- +14 ; Remark
- +15 SET RMK=0
- +16 FOR
- SET RMK=$ORDER(^LR(LRDFN,"MI",IX,7,RMK))
- IF +RMK'>0
- QUIT
- SET ^TMP("LRM",$JOB,"PARA","R",RMK)=^(RMK,0)
- +17 QUIT
- IDPARA ; Get parasite stage, quantity, and comment
- +1 NEW DA,DIC,DIQ,DR,PARA,STAGE
- +2 IF 'SN
- SET PARA=+^LR(LRDFN,"MI",IX,6,PN,0)
- SET PARA=$SELECT($DATA(EXPAND):PN_";"_$PIECE(^LAB(61.2,PARA,0),U),1:$PIECE(^LAB(61.2,PARA,0),U))
- SET ^TMP("LRM",$JOB,"PARA",PN)=PARA
- QUIT
- +3 SET DA=LRDFN
- SET DA(63.05)=IX
- SET DA(63.34)=PN
- SET DA(63.35)=SN
- SET DIC=63
- SET DIQ="STAGE"
- SET DIQ(0)="E"
- SET DR=5
- SET DR(63.05)=16
- SET DR(63.34)=1
- SET DR(63.35)=".01;1"
- DO EN^DIQ1
- +4 SET ^TMP("LRM",$JOB,"PARA",PN,SN)=STAGE(63.35,SN,.01,"E")_U_STAGE(63.35,SN,1,"E")
- +5 ; Comment
- +6 SET COM=0
- +7 FOR
- SET COM=$ORDER(^LR(LRDFN,"MI",IX,6,PN,1,SN,1,COM))
- IF COM'>0
- QUIT
- SET ^TMP("LRM",$JOB,"PARA",PN,SN,"COM",COM)=^(COM,0)
- +8 QUIT
- MYCO ; Get Mycology Work-up
- +1 NEW DA,DIC,DIQ,DR,DA,STATUS,GMW,ISO,FUN,RMK,COM,SMEAR
- +2 ; Work-up
- +3 IF $DATA(^LR(LRDFN,"MI",IX,8))
- Begin DoDot:1
- +4 SET DIC=63
- SET DA=LRDFN
- SET DA(63.05)=IX
- SET DR=5
- SET DR(63.05)=19
- SET DIQ="STATUS"
- +5 SET DIQ(0)="E"
- DO EN^DIQ1
- +6 SET ^TMP("LRM",$JOB,"MYCO",0)=$EXTRACT($PIECE(STATUS(63.05,IX,19,"E")," ",1),1,6)
- End DoDot:1
- +7 SET ISO=0
- +8 FOR
- SET ISO=$ORDER(^LR(LRDFN,"MI",IX,9,ISO))
- IF +ISO'>0
- QUIT
- Begin DoDot:1
- +9 DO FNGS
- SET ^TMP("LRM",$JOB,"MYCO",ISO)=$SELECT($DATA(EXPAND):ISO_";"_FUN,1:FUN)
- +10 ; Comment
- +11 SET COM=0
- +12 FOR
- SET COM=$ORDER(^LR(LRDFN,"MI",IX,9,ISO,1,COM))
- IF COM'>0
- QUIT
- SET ^TMP("LRM",$JOB,"MYCO",ISO,"COM",COM)=^(COM,0)
- End DoDot:1
- +13 ; Mycology smear/prep
- +14 SET SMEAR=0
- +15 FOR
- SET SMEAR=$ORDER(^LR(LRDFN,"MI",IX,15,SMEAR))
- IF SMEAR'>0
- QUIT
- SET ^TMP("LRM",$JOB,"MYCO","SMEAR",SMEAR)=^(SMEAR,0)
- +16 ; Remark
- +17 SET RMK=0
- +18 FOR
- SET RMK=$ORDER(^LR(LRDFN,"MI",IX,10,RMK))
- IF +RMK'>0
- QUIT
- SET ^TMP("LRM",$JOB,"MYCO","R",RMK)=^(RMK,0)
- +19 QUIT
- FNGS ; Fungus/Yeast
- +1 NEW QTY
- SET FUN=+^LR(LRDFN,"MI",IX,9,ISO,0)
- SET QTY=$PIECE(^(0),U,2)
- +2 SET FUN=$PIECE(^LAB(61.2,FUN,0),U)
- SET FUN=FUN_U_QTY
- +3 QUIT
- TB ; Gets Mycobacteriology Work-up
- +1 NEW DA,DIC,DIQ,DR,STATUS,GMW,ISO,MB,RMK,X,%X,Y,%Y,COM,MY,GMTB,GMTBA,GMTBF,GMTBL
- +2 IF $DATA(^LR(LRDFN,"MI",IX,11))
- Begin DoDot:1
- +3 SET DIC=63
- SET DA=LRDFN
- SET DA(63.05)=IX
- SET DR=5
- SET DR(63.05)="23;24;25"
- SET DIQ="STATUS"
- +4 SET DIQ(0)="E"
- DO EN^DIQ1
- +5 ; Status, Acid Fast Stain, Quantity
- +6 SET ^TMP("LRM",$JOB,"TB",0)=$EXTRACT($PIECE(STATUS(63.05,IX,23,"E")," ",1),1,6)_U_STATUS(63.05,IX,24,"E")_U_STATUS(63.05,IX,25,"E")
- End DoDot:1
- +7 SET ISO=0
- +8 FOR
- SET ISO=$ORDER(^LR(LRDFN,"MI",IX,12,ISO))
- IF +ISO'>0
- QUIT
- Begin DoDot:1
- +9 DO MYCB
- SET ^TMP("LRM",$JOB,"TB",ISO)=$SELECT($DATA(EXPAND):ISO_";"_MB,1:MB)
- +10 ; Comment
- +11 SET COM=0
- +12 FOR
- SET COM=$ORDER(^LR(LRDFN,"MI",IX,12,ISO,1,COM))
- IF COM'>0
- QUIT
- SET ^TMP("LRM",$JOB,"TB",ISO,"COM",COM)=^(COM,0)
- +13 ; Susceptiblities
- +14 SET GMTB=2
- +15 FOR
- SET GMTB=$ORDER(^LR(LRDFN,"MI",IX,12,ISO,GMTB))
- IF GMTB'["2."!(GMTB="")
- QUIT
- Begin DoDot:2
- +16 KILL GMTBL
- SET %X="^DD(63.39,""GL"","_+($GET(GMTB))_",1"
- SET %Y="GMTBL("
- DO %XY^%RCR
- +17 SET GMTBF=+($ORDER(GMTBL(1,0)))
- SET GMTBA=$$GET1^DID(63.39,GMTBF,"","LABEL")
- +18 SET ^TMP("LRM",$JOB,"TB",ISO,"SUSC",GMTB)=GMTBA_U_$PIECE(^LR(LRDFN,"MI",IX,12,ISO,GMTB),U)
- End DoDot:2
- End DoDot:1
- +19 ; Remark
- +20 SET RMK=0
- +21 FOR
- SET RMK=$ORDER(^LR(LRDFN,"MI",IX,13,RMK))
- IF RMK=""
- QUIT
- SET ^TMP("LRM",$JOB,"TB","R",RMK)=^(RMK,0)
- +22 QUIT
- MYCB ; Mycobacterium
- +1 NEW QTY
- SET MB=+^LR(LRDFN,"MI",IX,12,ISO,0)
- SET QTY=$PIECE(^(0),U,2)
- +2 SET MB=$PIECE(^LAB(61.2,MB,0),U)
- SET MB=MB_U_QTY
- +3 QUIT
- VIRO ; Gets Virology Work-up
- +1 NEW BUG,DA,DIC,DIQ,DR,GMW,ISO,RMK,STATUS
- +2 IF $DATA(^LR(LRDFN,"MI",IX,16))
- Begin DoDot:1
- +3 SET DIC=63
- SET DA=LRDFN
- SET DA(63.05)=IX
- SET DR=5
- SET DR(63.05)=34
- SET DIQ="STATUS"
- +4 SET DIQ(0)="E"
- DO EN^DIQ1
- +5 SET ^TMP("LRM",$JOB,"VIRO",0)=$EXTRACT($PIECE(STATUS(63.05,IX,34,"E")," ",1),1,6)
- End DoDot:1
- +6 SET ISO=0
- +7 FOR
- SET ISO=$ORDER(^LR(LRDFN,"MI",IX,17,ISO))
- IF +ISO'>0
- QUIT
- Begin DoDot:1
- +8 DO PHAGE
- SET ^TMP("LRM",$JOB,"VIRO",ISO)=$SELECT($DATA(EXPAND):ISO_";"_BUG,1:BUG)
- End DoDot:1
- +9 SET RMK=0
- +10 FOR
- SET RMK=$ORDER(^LR(LRDFN,"MI",IX,18,RMK))
- IF RMK=""
- QUIT
- SET ^TMP("LRM",$JOB,"VIRO","R",RMK)=^(RMK,0)
- +11 QUIT
- PHAGE ; Virus
- +1 SET BUG=+^LR(LRDFN,"MI",IX,17,ISO,0)
- SET BUG=$PIECE(^LAB(61.2,BUG,0),U)
- +2 QUIT
