- LA7COBX3 ;VA/DALOI/JMC - LAB OBX Segment message builder (MI subscripts) cont'd ; 22-Oct-2013 09:22 ; MAW
- ;;5.2;AUTOMATED LAB INSTRUMENTS;**46,1018,64,1027,68,1033**;NOV 01, 1997
- ;
- ; Reference to ^DD supported by DBIA #999
- ;
- MI ; Build OBX segments for results that are microbiology subscript.
- ; Called by LA7VOBX
- ;
- N I,LA761,LA76305,LA7ALT,LA7ALTCS,LA7CODE,LA7DIV,LA7IENS,LA7LOINC,LA7NLT,LA7OBX,LA7ORS,LA7PARNT,LA7SAVID,LA7SUBFL,LA7VAL,LA7VERP
- ;
- I $P(LRIDT,",",2) S LRIDT(2)=$P(LRIDT,",",2),LRIDT(3)=$P(LRIDT,",",3),LRIDT=$P(LRIDT,",")
- ;
- I '$D(^LR(LRDFN,LRSS,LRIDT)) Q
- ;
- F I=0,1,5,8,11,16 S LA76305(I)=$G(^LR(LRDFN,LRSS,LRIDT,I))
- ;
- S (LA7ALT,LA7ALTCS,LA7CODE,LA7ID,LA7LOINC,LA7NLT,LA7ORS,LA7SAVID,LA7SUBFL,LA7VAL,LA7VERP)=""
- ;
- ; Specimen topography
- S LA761=$P(LA76305(0),"^",5)
- ; Default codes
- S LA7CODE=$$DEFCODE^LA7VHLU5(LRSS,LRSB,LA7CODE,LA761)
- ;
- D SEC,GEN
- ;S LRSPEC=$P($G(LA76305(0)),U,11) ;MU2 get the microsusept specimen for SPM from collection sample field
- Q
- ;
- SEC ; Build section specific fields
- N LA7X,LA7Y
- ;
- ; Urine screen
- I LRSB=11.57 D Q
- . N LA7ERR
- . S LA7VERP=$P(LA76305(1),"^",3),LA7ORS=$P(LA76305(1),"^",2)
- . S LA7OBX(2)=$$OBX2^LA7COBX(63.05,11.57)
- . S LA7IENS=LRIDT_","_LRDFN_","
- . S LA7VAL=$$GET1^DIQ(63.05,LA7IENS,11.57,"","LA7ERR")
- . S LA7Y="MI-"_LRSB_"^"_$$GET1^DID(63.05,11.57,"","LABEL")_"^99VA63"
- . S LA7ALT=LA7Y_"^"_LA7Y
- ;
- ; Sputum Screen
- I LRSB=11.58 D Q
- . N LA7ERR
- . S LA7VERP=$P(LA76305(1),"^",3)
- . S LA7ORS=$P(LA76305(1),"^",2)
- . S LA7OBX(2)=$$OBX2^LA7COBX(63.05,11.58)
- . S LA7VAL=$P(^LR(LRDFN,LRSS,LRIDT,1),"^",5)
- . S LA7Y="MI-"_LRSB_"^"_$$GET1^DID(63.05,11.58,"","LABEL")_"^99VA63"
- . S LA7ALT=LA7Y_"^"_LA7Y
- ;
- ; Gram stain
- I LRSB=11.6 D Q
- . N LA7ERR
- . S LA7VERP=$P(LA76305(1),"^",3)
- . S LA7ORS=$P(LA76305(1),"^",2)
- . S LA7OBX(2)=$$OBX2^LA7COBX(63.05,11.6)
- . S LA7IENS=LRIDT(2)_","_LRIDT_","_LRDFN_","
- . S LA7VAL=$$GET1^DIQ(63.29,LA7IENS,.01,"","LA7ERR")
- . S LA7Y="MI-"_LRSB_"^"_$$GET1^DID(63.29,.01,"","LABEL")_"^99VA63"
- . S LA7ALT=LA7Y_"^"_LA7Y
- . ; Setup DoD special coding system
- . I LA7NVAF=1,$P(LA7CODE,"!",2) S LA7ALTCS="99VA64MG"
- ;
- ; Micro organism
- I $P(LRSB,",")=12 D Q
- . S LA7VERP=$P(LA76305(1),"^",3)
- . S LA7ORS=$P(LA76305(1),"^",2)
- . S LA7SUBFL=63.3
- . ; Working on colony count
- . I $P(LRSB,",",2)=1 D CC Q
- . ; Working on organism
- . I $G(LRIDT(3))="" D ORG Q
- . ; Working on susceptibilities
- . I $P(LA76305(1),"^",4) S LA7VERP=$P(LA76305(1),"^",4)
- . I $P(LRSB,",",2)<3 D MIC Q
- . I $P(LRSB,",",2)=3 D MICA Q
- ;
- ; Parasite organism
- I $P(LRSB,",")=16 D Q
- . S LA7ORS=$P(LA76305(5),"^",2)
- . S LA7VERP=$P(LA76305(5),"^",3)
- . ; Working on organism
- . S LA7SUBFL=63.34 D ORG
- ;
- ; Mycology organism
- I $P(LRSB,",")=20 D Q
- . S LA7ORS=$P(LA76305(8),"^",2)
- . S LA7VERP=$P(LA76305(8),"^",3)
- . S LA7SUBFL=63.37
- . ; Working on colony count
- . I $P(LRSB,",",2)=1 D CC Q
- . ; Working on organism
- . D ORG
- ;
- ; Acid Fast stain
- I LRSB=24 D Q
- . N LA7ERR
- . S LA7VERP=$P(LA76305(11),"^",3)
- . S LA7ORS=$P(LA76305(11),"^",2)
- . S LA7OBX(2)=$$OBX2^LA7COBX(63.05,24)
- . S LA7IENS=LRIDT_","_LRDFN_","
- . S LA7VAL=$$GET1^DIQ(63.05,LA7IENS,24,"","LA7ERR")
- . S LA7Y="MI-"_LRSB_"^"_$$GET1^DID(63.05,24,"","LABEL")_"^99VA63"
- . S LA7ALT=LA7Y_"^"_LA7Y
- ;
- ; Acid Fast stain quantity
- I LRSB=25 D Q
- . N LA7ERR
- . S LA7VERP=$P(LA76305(11),"^",3)
- . S LA7ORS=$P(LA76305(11),"^",2)
- . S LA7OBX(2)=$$OBX2^LA7COBX(63.05,25)
- . S LA7IENS=LRIDT_","_LRDFN_","
- . S LA7VAL=$$GET1^DIQ(63.05,LA7IENS,25,"","LA7ERR")
- . S LA7Y="MI-"_LRSB_"^"_$$GET1^DID(63.05,25,"","LABEL")_"^99VA63"
- . S LA7ALT=LA7Y_"^"_LA7Y
- ;
- ; TB organism
- I $P(LRSB,",")=26 D Q
- . S LA7ORS=$P(LA76305(11),"^",2)
- . S LA7VERP=$P(LA76305(11),"^",5)
- . S LA7SUBFL=63.39
- . ; Working on colony count
- . I $P(LRSB,",",2)=1 D CC Q
- . ; Working on organism
- . I $G(LRIDT(3))="" D ORG Q
- . ; Working on susceptibilities
- . D MIC
- ;
- ; Virology virus
- I $P(LRSB,",")=36 D Q
- . S LA7ORS=$P(LA76305(16),"^",2)
- . S LA7VERP=$P(LA76305(16),"^",3)
- . ; Working on virus
- . S LA7SUBFL=63.43
- . D ORG
- ;
- ; Antibiotic levels
- I $P(LRSB,",")=28 D Q
- . S LA7VERP=$P(LA76305(1),"^",3)
- . S LA7ORS=$P(LA76305(1),"^",2)
- . S LA7SUBFL=63.42
- . S LA7OBX(2)="SN"
- . S LA7X=$G(^LR(LRDFN,LRSS,LRIDT,14,LRIDT(2),0))
- . S $P(LA7CODE,"!",2)="93978.0000"
- . S $P(LA7CODE,"!",3)=$S($P(LA7X,"^",2)="P":44433,$P(LA7X,"^",2)="T":44434,1:23816)
- . S LA7VAL=$P(LA7X,"^",3)
- . S LA7Y="MI-"_$P(LRSB,",")_"-"_$P(LRSB,",",2)_"^"_$P(LA7X,"^")_"^99VA63"
- . S LA7ALT=LA7Y_"^"_LA7Y
- ;
- ;
- Q
- ;
- ;
- CC ; Organism's Colony count
- ; If "CFU/ml" found then move units to OBX-6 (Units).
- N LA7X
- ;
- S LA7ID=$P(LRSB,",")_"-"_LRIDT(2)
- S LA7IENS=LRIDT(2)_","_LRIDT_","_LRDFN_","
- S LA7OBX(2)=$$OBX2^LA7COBX(LA7SUBFL,1)
- S LA7VAL=$$GET1^DIQ(LA7SUBFL,LA7IENS,1)
- S LA7X=$$UP^XLFSTR(LA7VAL)
- I LA7X["CFU/ML" D
- . S LA7OBX(6)=$$OBX6^LA7COBX("CFU/ml","",LA7FS,LA7ECH,$G(LA7INTYP))
- . S LA7X("CFU/ml")="",LA7X("CFU/ML")=""
- . S LA7VAL=$$REPLACE^XLFSTR(LA7VAL,.LA7X)
- ;
- S LA7Y="MI-"_$P(LRSB,",")_"-1^"_$$GET1^DID(LA7SUBFL,1,"","LABEL")_"^99VA63"
- S LA7ALT=LA7Y_"^"_LA7Y
- ;
- Q
- ;
- ;
- ORG ; Organism
- ;
- N LA7X,LA7Y,X
- ;
- S LA7ID=LRSB_"-"_LRIDT(2)
- S LA7OBX(2)=$$OBX2^LA7COBX(LA7SUBFL,.01)
- S LA7IENS=LRIDT(2)_","_LRIDT_","_LRDFN_","
- S LA7VAL=""
- S LA7X=$$GET1^DIQ(LA7SUBFL,LA7IENS,.01,"I"),LA7X(.01)=$$GET1^DIQ(LA7SUBFL,LA7IENS,.01)
- ;
- S LA7NORG=$$FNDORG(LRDFN,LRIDT,LA7ND,LA7ORG) ;MU2
- ; Check for SNOMED coding/local coding as alternate
- S X=$$GET1^DIQ(LA7SUBFL,LA7IENS,".01:2")
- ;I X'="" D
- ;. S LA7VAL="E-"_X_"^"_LA7X(.01)_"^SNM",$P(LA7VAL,"^",4,6)=LA7X_"^"_LA7X(.01)_"^99VA61.2"
- ;. I $G(LA7NVAF)'=1 S LA7OBX(2)="CWE",$P(LA7VAL,"^",7,8)="1974^5.2",$P(LA7VAL,"^",9)=LA7X(.01)
- I X'="" D ;mu2
- . S LA7VAL=X_"^"_LA7X(.01)_"^SCT",$P(LA7VAL,"^",4,6)=$E(LA7X(.01),1,3)_"^"_LA7X(.01)_"^L"
- . I $G(LA7NVAF)'=1 S LA7OBX(2)="CWE",$P(LA7VAL,"^",7,8)="1974^5.2",$P(LA7VAL,"^",9)=LA7X(.01)
- ;
- ; If no SNOMED then use local coding as primary
- I LA7VAL="" D
- . S LA7VAL=LA7X_"^"_LA7X(.01)_"^L"
- . I $G(LA7NVAF)'=1 S LA7OBX(2)="CWE",$P(LA7VAL,"^",7)="5.2",$P(LA7VAL,"^",9)=LA7X(.01)
- ;
- S LA7Y="MI-"_$P(LRSB,",")_"-.01^"_$$GET1^DID(LA7SUBFL,.01,"","LABEL")_"^L"
- S LA7ALT=LA7Y_"^"_LA7Y
- ;
- ;TODO mu2 may need this back in a different way
- ;S LA7OBX(8)=$$OBX8^LA7COBX("A")
- ;
- ; Set flag to save sub-id for parent-child relationship
- S LA7SAVID=1
- Q
- ;
- ;
- MIC ; Organism's susceptibilities
- ;
- N LA7IENS,LA7SUB
- ;
- ; Bact or TB organism
- S LA7SUB=$S($P(LRSB,",")=12:3,1:12)
- ;
- S LA7OBX(2)=$$OBX2^LA7COBX(62.06,.01)
- ;
- ; Determine local code for antibiotic if not mapped to NLT or in file #62.06
- ; - Use file #62.06 entry if available otherwise generate from drug node field in file #63
- ; also used to convey local display name in 9th component
- S LA7X=""
- I $P(LRSB,",")=12 D
- . S LA7X=$O(^LAB(62.06,"AD",$P(LRSB,",",2),0))
- . I LA7X S LA7ALT=LA7X_"^"_$$GET1^DIQ(62.06,LA7X_",",.01)_"^L",LA7ALT=LA7ALT_"^"_LA7ALT
- I LA7ALT="" D
- . S LA7X=$P(LRSB,",",2),LA7Y=$O(^DD(LA7SUBFL,"GL",LA7X,1,0))
- . I LA7Y<1 Q
- . S LA7ALT="MIAB"_$P(LRSB,",")_"-"_$P(LRSB,",",2)_"^"_$$GET1^DID(LA7SUBFL,LA7Y,"","LABEL")_"^L"
- . S LA7ALT=LA7ALT_"^"_LA7ALT
- ;
- S LA7X=$G(^LR(LRDFN,"MI",LRIDT,LA7SUB,LRIDT(2),LRIDT(3)))
- S LA7VAL=$P(LA7X,"^")
- I LA7VAL'="" D
- . I "SIR"[$E(LA7VAL) S LA7OBX(8)=$$OBX8^LA7COBX($E(LA7VAL)) Q
- . I "SIR"[$E($P(LA7X,"^",2)) D Q
- .. S LA7OBX(8)=$$LOOKTAB^LA7CQRY1("HL7","0078",$E($P(LA7X,"^",2)),$E(LA7ECH))
- .. S $P(LA7OBX(8),$E(LA7ECH),7)="2.7"
- .. ;S LA7OBX(8)=$$OBX8^LA7COBX($E($P(LA7X,"^",2)))
- ;
- ; Determine access screen for this susceptibility
- I $P(LA7X,"^",3)="" S $P(LA7X,"^",3)="A"
- I $G(LA7INPT),$G(LRSS)="MI",$G(LA7OBRSN)>1 S LA7VAL="S" ;mu2 inpatient mu2 micro
- S LA7OBX(13)=$$OBX13^LA7COBX($P(LA7X,"^",3),$S($G(LA7INTYP)=30:"MIS-HDR",1:"MIS"),LA7FS,LA7ECH)
- ;
- Q
- ;
- ;
- MICA ; Bacteria organism's susceptibilities - free text
- ;
- N LA7SUB,LA7X
- S LA7OBX(2)="NM"
- ;
- ; Bact organism
- S LA7SUB=3
- ;
- ; Determine local code for free text antibiotic also used to convey local display name in 9th component
- S LA7X=$G(^LR(LRDFN,"MI",LRIDT,LA7SUB,LRIDT(2),3,LRIDT(3),0))
- S LA7ALT="MIAB"_$P(LRSB,",")_"-"_$P(LRSB,",",2)_"-"_$P(LRSB,",",3)_"^"_$P(LA7X,"^")_$S($P(LRSB,",",3)=1:" MIC",1:" MBC")_"^L"
- S LA7ALT=LA7ALT_"^"_LA7ALT
- S $P(LA7CODE,"!",2)="87565.0000"
- S $P(LA7CODE,"!",3)=$S($P(LRSB,",",3)=1:21070,1:23658)
- ;
- S LA7VAL=$P(LA7X,"^",$S($P(LRSB,",",3)=1:2,1:3))
- ;
- S LA7OBX(6)="UG/ML"
- S LA7OBX(8)=""
- ;
- Q
- ;
- ;
- GEN ; Fields common to all MI OBX segments.
- ;
- ; Initialize OBX segment
- S LA7OBX(0)="OBX"
- S LA7OBX(1)=$$OBX1^LA7COBX(.LA7OBXSN)
- ;
- N LA7WKI
- ;I $P(LA7CODE,"!",2)]"",$G(LA7953)="" S LA7WKI=$O(^LAM("E",$P(LA7CODE,"!",2),0)) ;will this break script #3 & #4 MU2
- ;need to figure out these codes here for micro
- I $P(LA7CODE,"!",2)]"" S LA7WKI=$O(^LAM("E",$P(LA7CODE,"!",2),0)) ;will this break script #9 MU2
- ;the following 2 lines will look up the org if there
- ;I $G(LA7NORG) S LA7WKI=$O(^LAB(61.2,LA7NORG,9,"B",0))
- I $G(LA7WKI) S LA7953=$P($G(^LAM(LA7WKI,9)),U)
- ;MU2 added 3 below lines for NIST 9 testing, this seems to work for both NIST 4 and NIST 9, will leave this in for now, until retesting
- I $G(LA7NORG),$G(LA7OBRSN)=1 D
- . S LA7WKI=$O(^LAB(61.2,LA7NORG,9,"B",0))
- . S LA7953=$P($G(^LAM(LA7WKI,9)),U)
- S LA7OBX(3)=$$OBX3^LA7COBX($P(LA7CODE,"!",2),$S($G(LA7953):LA7953,1:$P(LA7CODE,"!",3)),LA7ALT,LA7FS,LA7ECH,$G(LA7INTYP))
- I $G(LA7INPT) S $P(LA7OBX(3),$E(LA7ECH),9)=$E($P(LA7OBX(3),$E(LA7ECH),2),1,30) ;mu2 inpatient
- K LA7NORG
- ;S LA7OBX(3)=$$OBX3^LA7COBX($P(LA7CODE,"!",2),$P(LA7CODE,"!",3),LA7ALT,LA7FS,LA7ECH,$G(LA7INTYP))
- ;
- ; Change normal coding system for DoD special
- I LA7NVAF=1,LA7ALTCS'="" D
- . F I=3,6 I $P(LA7OBX(3),$E(LA7ECH,1),I)="99VA64" S $P(LA7OBX(3),$E(LA7ECH,1),I)=LA7ALTCS Q
- ;
- I $G(LA7INPT) S LA7OBX(4)=$P($G(LA7OBXSN),"-",2) ;mu2 inpatient micro
- I $G(LA7INPT),$G(LA7OBX(4))="" S LA7OBX(4)=1
- ; Test value
- K LA75UNIT
- S LA7OBX(5)=$$OBX5^LA7COBX(LA7VAL,LA7OBX(2),LA7FS,LA7ECH)
- I $G(LA7OBX(5))["-" S LA7OBX(5)=$P(LA7OBX(5),"-",2)
- I $G(LA7OBX(2))="SN",$P(LA7OBX(5)," ",2)]"" D
- . S LA75UNIT=$P(LA7OBX(5)," ",2)
- . S LA7OBX(5)=$P(LA7OBX(5)," ")
- ;
- ; units
- I $G(LA7INPT),$G(LA75UNIT)="" S LA75UNIT="ug/mL" ;mu2 inpatient micro
- I $G(LA75UNIT)]"" D
- . S $P(LA7OBX(6),$E(LA7ECH))=LA75UNIT
- . S $P(LA7OBX(6),$E(LA7ECH),2)=$P($$LOOKTAB^LA7CQRY1("","UCUM",LA75UNIT,$E(LA7ECH)),$E(LA7ECH),2)
- . S $P(LA7OBX(6),$E(LA7ECH),3)="UCUM"
- . S $P(LA7OBX(6),$E(LA7ECH),4)=LA75UNIT
- . S $P(LA7OBX(6),$E(LA7ECH),6)="L"
- . S $P(LA7OBX(6),$E(LA7ECH),7)="1.8.2"
- ; Set sub-id and save for constructing parents
- I LA7ID'="" D
- . S LA7OBX(4)=$$OBX4^LA7COBX(LA7ID,LA7FS,LA7ECH)
- . I $G(LA7INPT),$G(LA7OBX(4))["-" S LA7OBX(4)=$P(LA7OBX(4),"-",2)
- . I $G(LA7INPT),$G(LA7OBX(4))="" S LA7OBX(4)=1
- . I LA7SAVID D
- . . F I=1,2 S LA7ID(LA7ID,I)=LA7OBX(I+2)
- . . I $G(HL("VER"))="2.2" S LA7ID(LA7ID,3)=LA7OBX(5) Q
- . . F I=2,4 I $P(LA7OBX(5),$E(LA7ECH,1),I)'="" S LA7ID(LA7ID,3)=$P(LA7OBX(5),$E(LA7ECH,1),I) Q
- ;
- ; Order result status - "P"artial, "F"inal , "A"mended results
- ; If no status from individual components then use status from zeroth node.
- ; If no release date then pending else final
- ; If amended, overrides all other status
- I $G(LA7INPT) S LA7OBX(8)="A" ;mu2 inpatient
- I LA7ORS="" S LA7ORS=$S('$P(LA76305(0),"^",3):"P",1:"F")
- I $P(LA76305(0),"^",9) S LA7ORS="A"
- S LA7OBX(11)=$$OBX11^LA7COBX(LA7ORS)
- ;
- S LA7DIV=$P($G(^LR(LRDFN,LRSS,LRIDT,"RF")),"^")
- I LA7DIV="",$$DIV4^XUSER(.LA7DIV,$P(LA76305(0),"^",4)) S LA7DIV=$O(LA7DIV(0))
- ;
- ; Observation date/time - collection date/time per HL7 standard
- I $P(LA76305(0),"^") S LA7OBX(14)=$$OBX14^LA7COBX($P(LA76305(0),"^"))
- ;
- ; Facility that performed the testing
- S LA7OBX(15)=$$OBX15^LA7COBX(LA7DIV,LA7FS,LA7ECH)
- ;
- ; Person that verified the test
- I $P(LA76305(0),"^",4) S LA7VERP=$P(LA76305(0),"^",4)
- I LA7VERP S LA7OBX(16)=$$OBX16^LA7COBX(LA7VERP,LA7DIV,LA7FS,LA7ECH)
- ;
- ; Date/time of the analysis
- I $P(LA76305(0),"^",10)'="" S LA7OBX(19)=$$OBX19^LA7COBX($P(LA76305(0),"^",10))
- I $G(LA7OBX(19))="" S LA7OBX(19)=$G(LA7OBX(14))
- ;
- ; Performing organization name/address
- I LA7DIV="" S LA7DIV=DUZ(2) ;MU2
- I LA7DIV'="" D
- . N LA7DT
- . S LA7OBX(23)=$$OBX23^LA7COBX(4,LA7DIV,LA7FS,LA7ECH)
- . S $P(LA7OBX(23),$E(LA7ECH,1),6)="CLIA"_$E(LA7ECH,4)_"2.16.840.1.113883.4.7"_$E(LA7ECH,4)_"ISO"
- . S $P(LA7OBX(23),$E(LA7ECH,1),7)="XX"
- . S $P(LA7OBX(23),$E(LA7ECH,1),10)=$P($G(^DIC(4,LA7DIV,99)),U)
- . S LA7DT=$S($P(LA76305(0),"^",3):$P(LA76305(0),"^",3),1:$$NOW^XLFDT)
- . S LA7OBX(24)=$$OBX24^LA7COBX(4,LA7DIV,LA7DT,LA7FS,LA7ECH)
- . S $P(LA7OBX(24),$E(LA7ECH),6)="USA"
- . S $P(LA7OBX(24),$E(LA7ECH),7)="L"
- . S $P(LA7OBX(24),$E(LA7ECH),9)=$P(LA7OBX(24),$E(LA7ECH),5) ;MU2 county code same as zip for now
- ;
- S LA7OBX(25)=$$OBX25^LA7COBX($$GET1^DIQ(9009029,DUZ(2),3027,"I"),DUZ(2),LA7FS,LA7ECH)
- S $P(LA7OBX(25),$E(LA7ECH),9)="NPI"_$E(LA7ECH,4)_"2.16.840.1.113883.4.6"_$E(LA7ECH,4)_"ISO"
- S $P(LA7OBX(25),$E(LA7ECH),10)="L"
- S $P(LA7OBX(25),$E(LA7ECH),13)="NPI"
- S $P(LA7OBX(25),$E(LA7ECH),14)="NPI_Facility"_$E(LA7ECH,4)_"2.16.840.1.113883.3.72.5.26"_$E(LA7ECH,4)_"ISO"
- S $P(LA7OBX(25),$E(LA7ECH),21)=$P(LA7OBX(25),$E(LA7ECH),6)
- I $G(LA7INPT) S $P(LA7OBX(25),$E(LA7ECH),7)="" ;mu2 inpatient
- ;
- D BUILDSEG^LA7VHLU(.LA7OBX,.LA7ARRAY,LA7FS)
- ;
- Q
- ;
- FNDORG(DF,IDT,ND,ORG) ;-- return the org IEN for file 61.2
- N ORGI
- S ORGI=$P($G(^LR(DF,LRSS,IDT,ND,ORG,0)),U)
- Q ORGI
- ;
- LA7COBX3 ;VA/DALOI/JMC - LAB OBX Segment message builder (MI subscripts) cont'd ; 22-Oct-2013 09:22 ; MAW
- +1 ;;5.2;AUTOMATED LAB INSTRUMENTS;**46,1018,64,1027,68,1033**;NOV 01, 1997
- +2 ;
- +3 ; Reference to ^DD supported by DBIA #999
- +4 ;
- MI ; Build OBX segments for results that are microbiology subscript.
- +1 ; Called by LA7VOBX
- +2 ;
- +3 NEW I,LA761,LA76305,LA7ALT,LA7ALTCS,LA7CODE,LA7DIV,LA7IENS,LA7LOINC,LA7NLT,LA7OBX,LA7ORS,LA7PARNT,LA7SAVID,LA7SUBFL,LA7VAL,LA7VERP
- +4 ;
- +5 IF $PIECE(LRIDT,",",2)
- SET LRIDT(2)=$PIECE(LRIDT,",",2)
- SET LRIDT(3)=$PIECE(LRIDT,",",3)
- SET LRIDT=$PIECE(LRIDT,",")
- +6 ;
- +7 IF '$DATA(^LR(LRDFN,LRSS,LRIDT))
- QUIT
- +8 ;
- +9 FOR I=0,1,5,8,11,16
- SET LA76305(I)=$GET(^LR(LRDFN,LRSS,LRIDT,I))
- +10 ;
- +11 SET (LA7ALT,LA7ALTCS,LA7CODE,LA7ID,LA7LOINC,LA7NLT,LA7ORS,LA7SAVID,LA7SUBFL,LA7VAL,LA7VERP)=""
- +12 ;
- +13 ; Specimen topography
- +14 SET LA761=$PIECE(LA76305(0),"^",5)
- +15 ; Default codes
- +16 SET LA7CODE=$$DEFCODE^LA7VHLU5(LRSS,LRSB,LA7CODE,LA761)
- +17 ;
- +18 DO SEC
- DO GEN
- +19 ;S LRSPEC=$P($G(LA76305(0)),U,11) ;MU2 get the microsusept specimen for SPM from collection sample field
- +20 QUIT
- +21 ;
- SEC ; Build section specific fields
- +1 NEW LA7X,LA7Y
- +2 ;
- +3 ; Urine screen
- +4 IF LRSB=11.57
- Begin DoDot:1
- +5 NEW LA7ERR
- +6 SET LA7VERP=$PIECE(LA76305(1),"^",3)
- SET LA7ORS=$PIECE(LA76305(1),"^",2)
- +7 SET LA7OBX(2)=$$OBX2^LA7COBX(63.05,11.57)
- +8 SET LA7IENS=LRIDT_","_LRDFN_","
- +9 SET LA7VAL=$$GET1^DIQ(63.05,LA7IENS,11.57,"","LA7ERR")
- +10 SET LA7Y="MI-"_LRSB_"^"_$$GET1^DID(63.05,11.57,"","LABEL")_"^99VA63"
- +11 SET LA7ALT=LA7Y_"^"_LA7Y
- End DoDot:1
- QUIT
- +12 ;
- +13 ; Sputum Screen
- +14 IF LRSB=11.58
- Begin DoDot:1
- +15 NEW LA7ERR
- +16 SET LA7VERP=$PIECE(LA76305(1),"^",3)
- +17 SET LA7ORS=$PIECE(LA76305(1),"^",2)
- +18 SET LA7OBX(2)=$$OBX2^LA7COBX(63.05,11.58)
- +19 SET LA7VAL=$PIECE(^LR(LRDFN,LRSS,LRIDT,1),"^",5)
- +20 SET LA7Y="MI-"_LRSB_"^"_$$GET1^DID(63.05,11.58,"","LABEL")_"^99VA63"
- +21 SET LA7ALT=LA7Y_"^"_LA7Y
- End DoDot:1
- QUIT
- +22 ;
- +23 ; Gram stain
- +24 IF LRSB=11.6
- Begin DoDot:1
- +25 NEW LA7ERR
- +26 SET LA7VERP=$PIECE(LA76305(1),"^",3)
- +27 SET LA7ORS=$PIECE(LA76305(1),"^",2)
- +28 SET LA7OBX(2)=$$OBX2^LA7COBX(63.05,11.6)
- +29 SET LA7IENS=LRIDT(2)_","_LRIDT_","_LRDFN_","
- +30 SET LA7VAL=$$GET1^DIQ(63.29,LA7IENS,.01,"","LA7ERR")
- +31 SET LA7Y="MI-"_LRSB_"^"_$$GET1^DID(63.29,.01,"","LABEL")_"^99VA63"
- +32 SET LA7ALT=LA7Y_"^"_LA7Y
- +33 ; Setup DoD special coding system
- +34 IF LA7NVAF=1
- IF $PIECE(LA7CODE,"!",2)
- SET LA7ALTCS="99VA64MG"
- End DoDot:1
- QUIT
- +35 ;
- +36 ; Micro organism
- +37 IF $PIECE(LRSB,",")=12
- Begin DoDot:1
- +38 SET LA7VERP=$PIECE(LA76305(1),"^",3)
- +39 SET LA7ORS=$PIECE(LA76305(1),"^",2)
- +40 SET LA7SUBFL=63.3
- +41 ; Working on colony count
- +42 IF $PIECE(LRSB,",",2)=1
- DO CC
- QUIT
- +43 ; Working on organism
- +44 IF $GET(LRIDT(3))=""
- DO ORG
- QUIT
- +45 ; Working on susceptibilities
- +46 IF $PIECE(LA76305(1),"^",4)
- SET LA7VERP=$PIECE(LA76305(1),"^",4)
- +47 IF $PIECE(LRSB,",",2)<3
- DO MIC
- QUIT
- +48 IF $PIECE(LRSB,",",2)=3
- DO MICA
- QUIT
- End DoDot:1
- QUIT
- +49 ;
- +50 ; Parasite organism
- +51 IF $PIECE(LRSB,",")=16
- Begin DoDot:1
- +52 SET LA7ORS=$PIECE(LA76305(5),"^",2)
- +53 SET LA7VERP=$PIECE(LA76305(5),"^",3)
- +54 ; Working on organism
- +55 SET LA7SUBFL=63.34
- DO ORG
- End DoDot:1
- QUIT
- +56 ;
- +57 ; Mycology organism
- +58 IF $PIECE(LRSB,",")=20
- Begin DoDot:1
- +59 SET LA7ORS=$PIECE(LA76305(8),"^",2)
- +60 SET LA7VERP=$PIECE(LA76305(8),"^",3)
- +61 SET LA7SUBFL=63.37
- +62 ; Working on colony count
- +63 IF $PIECE(LRSB,",",2)=1
- DO CC
- QUIT
- +64 ; Working on organism
- +65 DO ORG
- End DoDot:1
- QUIT
- +66 ;
- +67 ; Acid Fast stain
- +68 IF LRSB=24
- Begin DoDot:1
- +69 NEW LA7ERR
- +70 SET LA7VERP=$PIECE(LA76305(11),"^",3)
- +71 SET LA7ORS=$PIECE(LA76305(11),"^",2)
- +72 SET LA7OBX(2)=$$OBX2^LA7COBX(63.05,24)
- +73 SET LA7IENS=LRIDT_","_LRDFN_","
- +74 SET LA7VAL=$$GET1^DIQ(63.05,LA7IENS,24,"","LA7ERR")
- +75 SET LA7Y="MI-"_LRSB_"^"_$$GET1^DID(63.05,24,"","LABEL")_"^99VA63"
- +76 SET LA7ALT=LA7Y_"^"_LA7Y
- End DoDot:1
- QUIT
- +77 ;
- +78 ; Acid Fast stain quantity
- +79 IF LRSB=25
- Begin DoDot:1
- +80 NEW LA7ERR
- +81 SET LA7VERP=$PIECE(LA76305(11),"^",3)
- +82 SET LA7ORS=$PIECE(LA76305(11),"^",2)
- +83 SET LA7OBX(2)=$$OBX2^LA7COBX(63.05,25)
- +84 SET LA7IENS=LRIDT_","_LRDFN_","
- +85 SET LA7VAL=$$GET1^DIQ(63.05,LA7IENS,25,"","LA7ERR")
- +86 SET LA7Y="MI-"_LRSB_"^"_$$GET1^DID(63.05,25,"","LABEL")_"^99VA63"
- +87 SET LA7ALT=LA7Y_"^"_LA7Y
- End DoDot:1
- QUIT
- +88 ;
- +89 ; TB organism
- +90 IF $PIECE(LRSB,",")=26
- Begin DoDot:1
- +91 SET LA7ORS=$PIECE(LA76305(11),"^",2)
- +92 SET LA7VERP=$PIECE(LA76305(11),"^",5)
- +93 SET LA7SUBFL=63.39
- +94 ; Working on colony count
- +95 IF $PIECE(LRSB,",",2)=1
- DO CC
- QUIT
- +96 ; Working on organism
- +97 IF $GET(LRIDT(3))=""
- DO ORG
- QUIT
- +98 ; Working on susceptibilities
- +99 DO MIC
- End DoDot:1
- QUIT
- +100 ;
- +101 ; Virology virus
- +102 IF $PIECE(LRSB,",")=36
- Begin DoDot:1
- +103 SET LA7ORS=$PIECE(LA76305(16),"^",2)
- +104 SET LA7VERP=$PIECE(LA76305(16),"^",3)
- +105 ; Working on virus
- +106 SET LA7SUBFL=63.43
- +107 DO ORG
- End DoDot:1
- QUIT
- +108 ;
- +109 ; Antibiotic levels
- +110 IF $PIECE(LRSB,",")=28
- Begin DoDot:1
- +111 SET LA7VERP=$PIECE(LA76305(1),"^",3)
- +112 SET LA7ORS=$PIECE(LA76305(1),"^",2)
- +113 SET LA7SUBFL=63.42
- +114 SET LA7OBX(2)="SN"
- +115 SET LA7X=$GET(^LR(LRDFN,LRSS,LRIDT,14,LRIDT(2),0))
- +116 SET $PIECE(LA7CODE,"!",2)="93978.0000"
- +117 SET $PIECE(LA7CODE,"!",3)=$SELECT($PIECE(LA7X,"^",2)="P":44433,$PIECE(LA7X,"^",2)="T":44434,1:23816)
- +118 SET LA7VAL=$PIECE(LA7X,"^",3)
- +119 SET LA7Y="MI-"_$PIECE(LRSB,",")_"-"_$PIECE(LRSB,",",2)_"^"_$PIECE(LA7X,"^")_"^99VA63"
- +120 SET LA7ALT=LA7Y_"^"_LA7Y
- End DoDot:1
- QUIT
- +121 ;
- +122 ;
- +123 QUIT
- +124 ;
- +125 ;
- CC ; Organism's Colony count
- +1 ; If "CFU/ml" found then move units to OBX-6 (Units).
- +2 NEW LA7X
- +3 ;
- +4 SET LA7ID=$PIECE(LRSB,",")_"-"_LRIDT(2)
- +5 SET LA7IENS=LRIDT(2)_","_LRIDT_","_LRDFN_","
- +6 SET LA7OBX(2)=$$OBX2^LA7COBX(LA7SUBFL,1)
- +7 SET LA7VAL=$$GET1^DIQ(LA7SUBFL,LA7IENS,1)
- +8 SET LA7X=$$UP^XLFSTR(LA7VAL)
- +9 IF LA7X["CFU/ML"
- Begin DoDot:1
- +10 SET LA7OBX(6)=$$OBX6^LA7COBX("CFU/ml","",LA7FS,LA7ECH,$GET(LA7INTYP))
- +11 SET LA7X("CFU/ml")=""
- SET LA7X("CFU/ML")=""
- +12 SET LA7VAL=$$REPLACE^XLFSTR(LA7VAL,.LA7X)
- End DoDot:1
- +13 ;
- +14 SET LA7Y="MI-"_$PIECE(LRSB,",")_"-1^"_$$GET1^DID(LA7SUBFL,1,"","LABEL")_"^99VA63"
- +15 SET LA7ALT=LA7Y_"^"_LA7Y
- +16 ;
- +17 QUIT
- +18 ;
- +19 ;
- ORG ; Organism
- +1 ;
- +2 NEW LA7X,LA7Y,X
- +3 ;
- +4 SET LA7ID=LRSB_"-"_LRIDT(2)
- +5 SET LA7OBX(2)=$$OBX2^LA7COBX(LA7SUBFL,.01)
- +6 SET LA7IENS=LRIDT(2)_","_LRIDT_","_LRDFN_","
- +7 SET LA7VAL=""
- +8 SET LA7X=$$GET1^DIQ(LA7SUBFL,LA7IENS,.01,"I")
- SET LA7X(.01)=$$GET1^DIQ(LA7SUBFL,LA7IENS,.01)
- +9 ;
- +10 ;MU2
- SET LA7NORG=$$FNDORG(LRDFN,LRIDT,LA7ND,LA7ORG)
- +11 ; Check for SNOMED coding/local coding as alternate
- +12 SET X=$$GET1^DIQ(LA7SUBFL,LA7IENS,".01:2")
- +13 ;I X'="" D
- +14 ;. S LA7VAL="E-"_X_"^"_LA7X(.01)_"^SNM",$P(LA7VAL,"^",4,6)=LA7X_"^"_LA7X(.01)_"^99VA61.2"
- +15 ;. I $G(LA7NVAF)'=1 S LA7OBX(2)="CWE",$P(LA7VAL,"^",7,8)="1974^5.2",$P(LA7VAL,"^",9)=LA7X(.01)
- +16 ;mu2
- IF X'=""
- Begin DoDot:1
- +17 SET LA7VAL=X_"^"_LA7X(.01)_"^SCT"
- SET $PIECE(LA7VAL,"^",4,6)=$EXTRACT(LA7X(.01),1,3)_"^"_LA7X(.01)_"^L"
- +18 IF $GET(LA7NVAF)'=1
- SET LA7OBX(2)="CWE"
- SET $PIECE(LA7VAL,"^",7,8)="1974^5.2"
- SET $PIECE(LA7VAL,"^",9)=LA7X(.01)
- End DoDot:1
- +19 ;
- +20 ; If no SNOMED then use local coding as primary
- +21 IF LA7VAL=""
- Begin DoDot:1
- +22 SET LA7VAL=LA7X_"^"_LA7X(.01)_"^L"
- +23 IF $GET(LA7NVAF)'=1
- SET LA7OBX(2)="CWE"
- SET $PIECE(LA7VAL,"^",7)="5.2"
- SET $PIECE(LA7VAL,"^",9)=LA7X(.01)
- End DoDot:1
- +24 ;
- +25 SET LA7Y="MI-"_$PIECE(LRSB,",")_"-.01^"_$$GET1^DID(LA7SUBFL,.01,"","LABEL")_"^L"
- +26 SET LA7ALT=LA7Y_"^"_LA7Y
- +27 ;
- +28 ;TODO mu2 may need this back in a different way
- +29 ;S LA7OBX(8)=$$OBX8^LA7COBX("A")
- +30 ;
- +31 ; Set flag to save sub-id for parent-child relationship
- +32 SET LA7SAVID=1
- +33 QUIT
- +34 ;
- +35 ;
- MIC ; Organism's susceptibilities
- +1 ;
- +2 NEW LA7IENS,LA7SUB
- +3 ;
- +4 ; Bact or TB organism
- +5 SET LA7SUB=$SELECT($PIECE(LRSB,",")=12:3,1:12)
- +6 ;
- +7 SET LA7OBX(2)=$$OBX2^LA7COBX(62.06,.01)
- +8 ;
- +9 ; Determine local code for antibiotic if not mapped to NLT or in file #62.06
- +10 ; - Use file #62.06 entry if available otherwise generate from drug node field in file #63
- +11 ; also used to convey local display name in 9th component
- +12 SET LA7X=""
- +13 IF $PIECE(LRSB,",")=12
- Begin DoDot:1
- +14 SET LA7X=$ORDER(^LAB(62.06,"AD",$PIECE(LRSB,",",2),0))
- +15 IF LA7X
- SET LA7ALT=LA7X_"^"_$$GET1^DIQ(62.06,LA7X_",",.01)_"^L"
- SET LA7ALT=LA7ALT_"^"_LA7ALT
- End DoDot:1
- +16 IF LA7ALT=""
- Begin DoDot:1
- +17 SET LA7X=$PIECE(LRSB,",",2)
- SET LA7Y=$ORDER(^DD(LA7SUBFL,"GL",LA7X,1,0))
- +18 IF LA7Y<1
- QUIT
- +19 SET LA7ALT="MIAB"_$PIECE(LRSB,",")_"-"_$PIECE(LRSB,",",2)_"^"_$$GET1^DID(LA7SUBFL,LA7Y,"","LABEL")_"^L"
- +20 SET LA7ALT=LA7ALT_"^"_LA7ALT
- End DoDot:1
- +21 ;
- +22 SET LA7X=$GET(^LR(LRDFN,"MI",LRIDT,LA7SUB,LRIDT(2),LRIDT(3)))
- +23 SET LA7VAL=$PIECE(LA7X,"^")
- +24 IF LA7VAL'=""
- Begin DoDot:1
- +25 IF "SIR"[$EXTRACT(LA7VAL)
- SET LA7OBX(8)=$$OBX8^LA7COBX($EXTRACT(LA7VAL))
- QUIT
- +26 IF "SIR"[$EXTRACT($PIECE(LA7X,"^",2))
- Begin DoDot:2
- +27 SET LA7OBX(8)=$$LOOKTAB^LA7CQRY1("HL7","0078",$EXTRACT($PIECE(LA7X,"^",2)),$EXTRACT(LA7ECH))
- +28 SET $PIECE(LA7OBX(8),$EXTRACT(LA7ECH),7)="2.7"
- +29 ;S LA7OBX(8)=$$OBX8^LA7COBX($E($P(LA7X,"^",2)))
- End DoDot:2
- QUIT
- End DoDot:1
- +30 ;
- +31 ; Determine access screen for this susceptibility
- +32 IF $PIECE(LA7X,"^",3)=""
- SET $PIECE(LA7X,"^",3)="A"
- +33 ;mu2 inpatient mu2 micro
- IF $GET(LA7INPT)
- IF $GET(LRSS)="MI"
- IF $GET(LA7OBRSN)>1
- SET LA7VAL="S"
- +34 SET LA7OBX(13)=$$OBX13^LA7COBX($PIECE(LA7X,"^",3),$SELECT($GET(LA7INTYP)=30:"MIS-HDR",1:"MIS"),LA7FS,LA7ECH)
- +35 ;
- +36 QUIT
- +37 ;
- +38 ;
- MICA ; Bacteria organism's susceptibilities - free text
- +1 ;
- +2 NEW LA7SUB,LA7X
- +3 SET LA7OBX(2)="NM"
- +4 ;
- +5 ; Bact organism
- +6 SET LA7SUB=3
- +7 ;
- +8 ; Determine local code for free text antibiotic also used to convey local display name in 9th component
- +9 SET LA7X=$GET(^LR(LRDFN,"MI",LRIDT,LA7SUB,LRIDT(2),3,LRIDT(3),0))
- +10 SET LA7ALT="MIAB"_$PIECE(LRSB,",")_"-"_$PIECE(LRSB,",",2)_"-"_$PIECE(LRSB,",",3)_"^"_$PIECE(LA7X,"^")_$SELECT($PIECE(LRSB,",",3)=1:" MIC",1:" MBC")_"^L"
- +11 SET LA7ALT=LA7ALT_"^"_LA7ALT
- +12 SET $PIECE(LA7CODE,"!",2)="87565.0000"
- +13 SET $PIECE(LA7CODE,"!",3)=$SELECT($PIECE(LRSB,",",3)=1:21070,1:23658)
- +14 ;
- +15 SET LA7VAL=$PIECE(LA7X,"^",$SELECT($PIECE(LRSB,",",3)=1:2,1:3))
- +16 ;
- +17 SET LA7OBX(6)="UG/ML"
- +18 SET LA7OBX(8)=""
- +19 ;
- +20 QUIT
- +21 ;
- +22 ;
- GEN ; Fields common to all MI OBX segments.
- +1 ;
- +2 ; Initialize OBX segment
- +3 SET LA7OBX(0)="OBX"
- +4 SET LA7OBX(1)=$$OBX1^LA7COBX(.LA7OBXSN)
- +5 ;
- +6 NEW LA7WKI
- +7 ;I $P(LA7CODE,"!",2)]"",$G(LA7953)="" S LA7WKI=$O(^LAM("E",$P(LA7CODE,"!",2),0)) ;will this break script #3 & #4 MU2
- +8 ;need to figure out these codes here for micro
- +9 ;will this break script #9 MU2
- IF $PIECE(LA7CODE,"!",2)]""
- SET LA7WKI=$ORDER(^LAM("E",$PIECE(LA7CODE,"!",2),0))
- +10 ;the following 2 lines will look up the org if there
- +11 ;I $G(LA7NORG) S LA7WKI=$O(^LAB(61.2,LA7NORG,9,"B",0))
- +12 IF $GET(LA7WKI)
- SET LA7953=$PIECE($GET(^LAM(LA7WKI,9)),U)
- +13 ;MU2 added 3 below lines for NIST 9 testing, this seems to work for both NIST 4 and NIST 9, will leave this in for now, until retesting
- +14 IF $GET(LA7NORG)
- IF $GET(LA7OBRSN)=1
- Begin DoDot:1
- +15 SET LA7WKI=$ORDER(^LAB(61.2,LA7NORG,9,"B",0))
- +16 SET LA7953=$PIECE($GET(^LAM(LA7WKI,9)),U)
- End DoDot:1
- +17 SET LA7OBX(3)=$$OBX3^LA7COBX($PIECE(LA7CODE,"!",2),$SELECT($GET(LA7953):LA7953,1:$PIECE(LA7CODE,"!",3)),LA7ALT,LA7FS,LA7ECH,$GET(LA7INTYP))
- +18 ;mu2 inpatient
- IF $GET(LA7INPT)
- SET $PIECE(LA7OBX(3),$EXTRACT(LA7ECH),9)=$EXTRACT($PIECE(LA7OBX(3),$EXTRACT(LA7ECH),2),1,30)
- +19 KILL LA7NORG
- +20 ;S LA7OBX(3)=$$OBX3^LA7COBX($P(LA7CODE,"!",2),$P(LA7CODE,"!",3),LA7ALT,LA7FS,LA7ECH,$G(LA7INTYP))
- +21 ;
- +22 ; Change normal coding system for DoD special
- +23 IF LA7NVAF=1
- IF LA7ALTCS'=""
- Begin DoDot:1
- +24 FOR I=3,6
- IF $PIECE(LA7OBX(3),$EXTRACT(LA7ECH,1),I)="99VA64"
- SET $PIECE(LA7OBX(3),$EXTRACT(LA7ECH,1),I)=LA7ALTCS
- QUIT
- End DoDot:1
- +25 ;
- +26 ;mu2 inpatient micro
- IF $GET(LA7INPT)
- SET LA7OBX(4)=$PIECE($GET(LA7OBXSN),"-",2)
- +27 IF $GET(LA7INPT)
- IF $GET(LA7OBX(4))=""
- SET LA7OBX(4)=1
- +28 ; Test value
- +29 KILL LA75UNIT
- +30 SET LA7OBX(5)=$$OBX5^LA7COBX(LA7VAL,LA7OBX(2),LA7FS,LA7ECH)
- +31 IF $GET(LA7OBX(5))["-"
- SET LA7OBX(5)=$PIECE(LA7OBX(5),"-",2)
- +32 IF $GET(LA7OBX(2))="SN"
- IF $PIECE(LA7OBX(5)," ",2)]""
- Begin DoDot:1
- +33 SET LA75UNIT=$PIECE(LA7OBX(5)," ",2)
- +34 SET LA7OBX(5)=$PIECE(LA7OBX(5)," ")
- End DoDot:1
- +35 ;
- +36 ; units
- +37 ;mu2 inpatient micro
- IF $GET(LA7INPT)
- IF $GET(LA75UNIT)=""
- SET LA75UNIT="ug/mL"
- +38 IF $GET(LA75UNIT)]""
- Begin DoDot:1
- +39 SET $PIECE(LA7OBX(6),$EXTRACT(LA7ECH))=LA75UNIT
- +40 SET $PIECE(LA7OBX(6),$EXTRACT(LA7ECH),2)=$PIECE($$LOOKTAB^LA7CQRY1("","UCUM",LA75UNIT,$EXTRACT(LA7ECH)),$EXTRACT(LA7ECH),2)
- +41 SET $PIECE(LA7OBX(6),$EXTRACT(LA7ECH),3)="UCUM"
- +42 SET $PIECE(LA7OBX(6),$EXTRACT(LA7ECH),4)=LA75UNIT
- +43 SET $PIECE(LA7OBX(6),$EXTRACT(LA7ECH),6)="L"
- +44 SET $PIECE(LA7OBX(6),$EXTRACT(LA7ECH),7)="1.8.2"
- End DoDot:1
- +45 ; Set sub-id and save for constructing parents
- +46 IF LA7ID'=""
- Begin DoDot:1
- +47 SET LA7OBX(4)=$$OBX4^LA7COBX(LA7ID,LA7FS,LA7ECH)
- +48 IF $GET(LA7INPT)
- IF $GET(LA7OBX(4))["-"
- SET LA7OBX(4)=$PIECE(LA7OBX(4),"-",2)
- +49 IF $GET(LA7INPT)
- IF $GET(LA7OBX(4))=""
- SET LA7OBX(4)=1
- +50 IF LA7SAVID
- Begin DoDot:2
- +51 FOR I=1,2
- SET LA7ID(LA7ID,I)=LA7OBX(I+2)
- +52 IF $GET(HL("VER"))="2.2"
- SET LA7ID(LA7ID,3)=LA7OBX(5)
- QUIT
- +53 FOR I=2,4
- IF $PIECE(LA7OBX(5),$EXTRACT(LA7ECH,1),I)'=""
- SET LA7ID(LA7ID,3)=$PIECE(LA7OBX(5),$EXTRACT(LA7ECH,1),I)
- QUIT
- End DoDot:2
- End DoDot:1
- +54 ;
- +55 ; Order result status - "P"artial, "F"inal , "A"mended results
- +56 ; If no status from individual components then use status from zeroth node.
- +57 ; If no release date then pending else final
- +58 ; If amended, overrides all other status
- +59 ;mu2 inpatient
- IF $GET(LA7INPT)
- SET LA7OBX(8)="A"
- +60 IF LA7ORS=""
- SET LA7ORS=$SELECT('$PIECE(LA76305(0),"^",3):"P",1:"F")
- +61 IF $PIECE(LA76305(0),"^",9)
- SET LA7ORS="A"
- +62 SET LA7OBX(11)=$$OBX11^LA7COBX(LA7ORS)
- +63 ;
- +64 SET LA7DIV=$PIECE($GET(^LR(LRDFN,LRSS,LRIDT,"RF")),"^")
- +65 IF LA7DIV=""
- IF $$DIV4^XUSER(.LA7DIV,$PIECE(LA76305(0),"^",4))
- SET LA7DIV=$ORDER(LA7DIV(0))
- +66 ;
- +67 ; Observation date/time - collection date/time per HL7 standard
- +68 IF $PIECE(LA76305(0),"^")
- SET LA7OBX(14)=$$OBX14^LA7COBX($PIECE(LA76305(0),"^"))
- +69 ;
- +70 ; Facility that performed the testing
- +71 SET LA7OBX(15)=$$OBX15^LA7COBX(LA7DIV,LA7FS,LA7ECH)
- +72 ;
- +73 ; Person that verified the test
- +74 IF $PIECE(LA76305(0),"^",4)
- SET LA7VERP=$PIECE(LA76305(0),"^",4)
- +75 IF LA7VERP
- SET LA7OBX(16)=$$OBX16^LA7COBX(LA7VERP,LA7DIV,LA7FS,LA7ECH)
- +76 ;
- +77 ; Date/time of the analysis
- +78 IF $PIECE(LA76305(0),"^",10)'=""
- SET LA7OBX(19)=$$OBX19^LA7COBX($PIECE(LA76305(0),"^",10))
- +79 IF $GET(LA7OBX(19))=""
- SET LA7OBX(19)=$GET(LA7OBX(14))
- +80 ;
- +81 ; Performing organization name/address
- +82 ;MU2
- IF LA7DIV=""
- SET LA7DIV=DUZ(2)
- +83 IF LA7DIV'=""
- Begin DoDot:1
- +84 NEW LA7DT
- +85 SET LA7OBX(23)=$$OBX23^LA7COBX(4,LA7DIV,LA7FS,LA7ECH)
- +86 SET $PIECE(LA7OBX(23),$EXTRACT(LA7ECH,1),6)="CLIA"_$EXTRACT(LA7ECH,4)_"2.16.840.1.113883.4.7"_$EXTRACT(LA7ECH,4)_"ISO"
- +87 SET $PIECE(LA7OBX(23),$EXTRACT(LA7ECH,1),7)="XX"
- +88 SET $PIECE(LA7OBX(23),$EXTRACT(LA7ECH,1),10)=$PIECE($GET(^DIC(4,LA7DIV,99)),U)
- +89 SET LA7DT=$SELECT($PIECE(LA76305(0),"^",3):$PIECE(LA76305(0),"^",3),1:$$NOW^XLFDT)
- +90 SET LA7OBX(24)=$$OBX24^LA7COBX(4,LA7DIV,LA7DT,LA7FS,LA7ECH)
- +91 SET $PIECE(LA7OBX(24),$EXTRACT(LA7ECH),6)="USA"
- +92 SET $PIECE(LA7OBX(24),$EXTRACT(LA7ECH),7)="L"
- +93 ;MU2 county code same as zip for now
- SET $PIECE(LA7OBX(24),$EXTRACT(LA7ECH),9)=$PIECE(LA7OBX(24),$EXTRACT(LA7ECH),5)
- End DoDot:1
- +94 ;
- +95 SET LA7OBX(25)=$$OBX25^LA7COBX($$GET1^DIQ(9009029,DUZ(2),3027,"I"),DUZ(2),LA7FS,LA7ECH)
- +96 SET $PIECE(LA7OBX(25),$EXTRACT(LA7ECH),9)="NPI"_$EXTRACT(LA7ECH,4)_"2.16.840.1.113883.4.6"_$EXTRACT(LA7ECH,4)_"ISO"
- +97 SET $PIECE(LA7OBX(25),$EXTRACT(LA7ECH),10)="L"
- +98 SET $PIECE(LA7OBX(25),$EXTRACT(LA7ECH),13)="NPI"
- +99 SET $PIECE(LA7OBX(25),$EXTRACT(LA7ECH),14)="NPI_Facility"_$EXTRACT(LA7ECH,4)_"2.16.840.1.113883.3.72.5.26"_$EXTRACT(LA7ECH,4)_"ISO"
- +100 SET $PIECE(LA7OBX(25),$EXTRACT(LA7ECH),21)=$PIECE(LA7OBX(25),$EXTRACT(LA7ECH),6)
- +101 ;mu2 inpatient
- IF $GET(LA7INPT)
- SET $PIECE(LA7OBX(25),$EXTRACT(LA7ECH),7)=""
- +102 ;
- +103 DO BUILDSEG^LA7VHLU(.LA7OBX,.LA7ARRAY,LA7FS)
- +104 ;
- +105 QUIT
- +106 ;
- FNDORG(DF,IDT,ND,ORG) ;-- return the org IEN for file 61.2
- +1 NEW ORGI
- +2 SET ORGI=$PIECE($GET(^LR(DF,LRSS,IDT,ND,ORG,0)),U)
- +3 QUIT ORGI
- +4 ;