ORDV05X ; slc/jdl - Microbiology Extended Extracts ;6/13/2001 11:59AM
;;3.0;ORDER ENTRY/RESULTS REPORTING;**109,208**;Dec 17, 1997
;;Called from ORDV05E, return ^TMP("ORM",$J in GCPR format
;;For Parasitology,Mycology,Mycobacteriology,Virology in GCPR
PARA ; Get Parasitology Work-up
N DA,DIC,DIQ,DR,STATUS,PN,SN,RMK,SMEAR,COM,PARAIEN
I $D(^LR(LRDFN,"MI",IX,5)) D
. S DIC=63,DA=LRDFN,DA(63.05)=IX,DR=5,DR(63.05)=15,DIQ="STATUS"
. S DIQ(0)="E" D EN^DIQ1
. S ^TMP("ORM",$J,RPT,SS)=^TMP("ORM",$J,RPT,SS)_U_$E($P(STATUS(63.05,IX,15,"E")," ",1),1,6)
S PN=0
F S PN=$O(^LR(LRDFN,"MI",IX,6,PN)) Q:+PN'>0 D
. S PARAIEN=+^LR(LRDFN,"MI",IX,6,PN,0),SN=0
. D IDPARA
. F S SN=$O(^LR(LRDFN,"MI",IX,6,PN,1,SN)) Q:+SN'>0 D IDPARA
; Parasitology smear/prep
S SMEAR=0
F S SMEAR=$O(^LR(LRDFN,"MI",IX,24,SMEAR)) Q:SMEAR'>0 S ^TMP("ORM",$J,RPT,SS,"IMP","PARA","SMEAR",SMEAR)=^(SMEAR,0)
; remark
S RMK=0
F S RMK=$O(^LR(LRDFN,"MI",IX,7,RMK)) Q:+RMK'>0 S ^TMP("ORM",$J,RPT,SS,"IMP","PARA","RMK",RMK)=^(RMK,0)
Q
IDPARA ;Get parasite stage, quantity, and comment
N DA,DIC,DIQ,DR,PARA,STAGE
I 'SN S PARA=$S($D(EXPAND):PN_";"_$P(^LAB(61.2,PARAIEN,0),U),1:$P(^LAB(61.2,PARAIEN,0),U)),^TMP("ORM",$J,RPT,SS,"RPT",PARAIEN)="P"_U_PARA Q
S DA=LRDFN,DA(63.05)=IX,DA(63.34)=PN,DA(63.35)=SN,DIC=63,DIQ="STAGE",DIQ(0)="E",DR=5,DR(63.05)=16,DR(63.34)=1,DR(63.35)=".01;1" D EN^DIQ1
S ^TMP("ORM",$J,RPT,SS,"RPT",PARAIEN,SN)=STAGE(63.35,SN,.01,"E")_U_STAGE(63.35,SN,1,"E")
;comment
S COM=0
F S COM=$O(^LR(LRDFN,"MI",IX,6,PN,1,SN,1,COM)) Q:COM'>0 S ^TMP("ORM",$J,RPT,SS,"RPT",PARAIEN,SN,COM)=^(COM,0)
Q
MYCO ; Get Mycology Work-up
N DA,DIC,DIQ,DR,DA,STATUS,GMW,ISO,FUN,RMK,COM,SMEAR,MYCOIEN
I $D(^LR(LRDFN,"MI",IX,8)) D
. S DIC=63,DA=LRDFN,DA(63.05)=IX,DR=5,DR(63.05)=19,DIQ="STATUS"
. S DIQ(0)="E" D EN^DIQ1
. S ^TMP("ORM",$J,RPT,SS)=^TMP("ORM",$J,RPT,SS)_U_$E($P(STATUS(63.05,IX,19,"E")," ",1),1,6)
S ISO=0
F S ISO=$O(^LR(LRDFN,"MI",IX,9,ISO)) Q:+ISO'>0 D
. S MYCOIEN=+^LR(LRDFN,"MI",IX,9,ISO,0)
. D FNGS S ^TMP("ORM",$J,RPT,SS,"RPT",MYCOIEN)="M"_U_$S($D(EXPAND):ISO_";"_FUN,1:FUN)
. ;comment
. S COM=0
. F S COM=$O(^LR(LRDFN,"MI",IX,9,ISO,1,COM)) Q:COM'>0 S ^TMP("ORM",$J,RPT,SS,"RPT",MYCOIEN,"COM",COM)=^(COM,0)
; Mycology smear/prep
S SMEAR=0
F S SMEAR=$O(^LR(LRDFN,"MI",IX,15,SMEAR)) Q:SMEAR'>0 S ^TMP("ORM",$J,RPT,SS,"IMP","MYCO","SMEAR",SMEAR)=^(SMEAR,0)
; remark
S RMK=0
F S RMK=$O(^LR(LRDFN,"MI",IX,10,RMK)) Q:+RMK'>0 S ^TMP("ORM",$J,RPT,SS,"IMP","MYCO","RMK",RMK)=^(RMK,0)
Q
FNGS N QTY
S FUN=+^LR(LRDFN,"MI",IX,9,ISO,0),QTY=$P(^(0),U,2),FUN=$P(^LAB(61.2,FUN,0),U)
S FUN=FUN_U_QTY
Q
TB ; Gets Mycobacteriology Work-up
N DA,DIC,DIQ,DR,STATUS,GMW,ISO,MB,RMK,X,Y,COM,MY,GMTB,GMTBA,TBIEN
I $D(^LR(LRDFN,"MI",IX,11)) D
. S DIC=63,DA=LRDFN,DA(63.05)=IX,DR=5,DR(63.05)="23;24;25",DIQ="STATUS"
. S DIQ(0)="E" D EN^DIQ1
. ;Status, Acid Fast Stain, Quantity
. S ^TMP("ORM",$J,RPT,SS)=^TMP("ORM",$J,RPT,SS)_U_$E($P(STATUS(63.05,IX,23,"E")," ",1),1,6)
. S ^TMP("ORM",$J,RPT,SS,"IMP","TB","ACID FAST STAIN")=STATUS(63.05,IX,24,"E")_U_STATUS(63.05,IX,25,"E")
S ISO=0
F S ISO=$O(^LR(LRDFN,"MI",IX,12,ISO)) Q:+ISO'>0 D
. S TBIEN=+^LR(LRDFN,"MI",IX,12,ISO,0)
. D MYCB S ^TMP("ORM",$J,RPT,SS,"RPT",TBIEN)="TB"_U_$S($D(EXPAND):ISO_";"_MB,1:MB)
. ;comment
. S COM=0
. F S COM=$O(^LR(LRDFN,"MI",IX,12,TBIEN,1,COM)) Q:COM'>0 S ^TMP("ORM",$J,RPT,SS,"RPT",TBIEN,"COM",COM)=^(COM,0)
. ;Susceptiblities
. S GMTB=2
. F S GMTB=$O(^LR(LRDFN,"MI",IX,12,ISO,GMTB)) Q:GMTB'["2."!(GMTB="") D
. . S GMTBA=+$O(^DD(63.39,"GL",GMTB,1,0))
. . S GMTBA=$$GET1^DID(63.39,GMTBA,"","LABEL")
. . S ^TMP("ORM",$J,RPT,SS,"RPT",TBIEN,GMTB)=GMTBA_U_$P(^LR(LRDFN,"MI",IX,12,ISO,GMTB),U)
; remark
S RMK=0
F S RMK=$O(^LR(LRDFN,"MI",IX,13,RMK)) Q:RMK="" S ^TMP("ORM",$J,RPT,SS,"IMP","TB","RMK",RMK)=^(RMK,0)
Q
MYCB N QTY
S QTY=$P(^(0),U,2),MB=$P(^LAB(61.2,TBIEN,0),U)
S MB=MB_U_QTY
Q
VIRO ; Gets Virology Work-up
N BUG,DA,DIC,DIQ,DR,GMW,ISO,RMK,STATUS,VIROIEN
I $D(^LR(LRDFN,"MI",IX,16)) D
. S DIC=63,DA=LRDFN,DA(63.05)=IX,DR=5,DR(63.05)=34,DIQ="STATUS"
. S DIQ(0)="E" D EN^DIQ1
. S ^TMP("ORM",$J,RPT,SS)=^TMP("ORM",$J,RPT,SS)_U_$E($P(STATUS(63.05,IX,34,"E")," ",1),1,6)
S ISO=0
F S ISO=$O(^LR(LRDFN,"MI",IX,17,ISO)) Q:+ISO'>0 D
. S VIROIEN=+^LR(LRDFN,"MI",IX,17,ISO,0)
. D PHAGE S ^TMP("ORM",$J,RPT,SS,"RPT",VIROIEN)="V"_U_$S($D(EXPAND):ISO_";"_BUG,1:BUG)
S RMK=0
F S RMK=$O(^LR(LRDFN,"MI",IX,18,RMK)) Q:RMK="" S ^TMP("ORM",$J,RPT,SS,"IMP","VIRO","RMK",RMK)=^(RMK,0)
Q
PHAGE S BUG=$P(^LAB(61.2,VIROIEN,0),U)
Q
ORDV05X ; slc/jdl - Microbiology Extended Extracts ;6/13/2001 11:59AM
+1 ;;3.0;ORDER ENTRY/RESULTS REPORTING;**109,208**;Dec 17, 1997
+2 ;;Called from ORDV05E, return ^TMP("ORM",$J in GCPR format
+3 ;;For Parasitology,Mycology,Mycobacteriology,Virology in GCPR
PARA ; Get Parasitology Work-up
+1 NEW DA,DIC,DIQ,DR,STATUS,PN,SN,RMK,SMEAR,COM,PARAIEN
+2 IF $DATA(^LR(LRDFN,"MI",IX,5))
Begin DoDot:1
+3 SET DIC=63
SET DA=LRDFN
SET DA(63.05)=IX
SET DR=5
SET DR(63.05)=15
SET DIQ="STATUS"
+4 SET DIQ(0)="E"
DO EN^DIQ1
+5 SET ^TMP("ORM",$JOB,RPT,SS)=^TMP("ORM",$JOB,RPT,SS)_U_$EXTRACT($PIECE(STATUS(63.05,IX,15,"E")," ",1),1,6)
End DoDot:1
+6 SET PN=0
+7 FOR
SET PN=$ORDER(^LR(LRDFN,"MI",IX,6,PN))
IF +PN'>0
QUIT
Begin DoDot:1
+8 SET PARAIEN=+^LR(LRDFN,"MI",IX,6,PN,0)
SET SN=0
+9 DO IDPARA
+10 FOR
SET SN=$ORDER(^LR(LRDFN,"MI",IX,6,PN,1,SN))
IF +SN'>0
QUIT
DO IDPARA
End DoDot:1
+11 ; Parasitology smear/prep
+12 SET SMEAR=0
+13 FOR
SET SMEAR=$ORDER(^LR(LRDFN,"MI",IX,24,SMEAR))
IF SMEAR'>0
QUIT
SET ^TMP("ORM",$JOB,RPT,SS,"IMP","PARA","SMEAR",SMEAR)=^(SMEAR,0)
+14 ; remark
+15 SET RMK=0
+16 FOR
SET RMK=$ORDER(^LR(LRDFN,"MI",IX,7,RMK))
IF +RMK'>0
QUIT
SET ^TMP("ORM",$JOB,RPT,SS,"IMP","PARA","RMK",RMK)=^(RMK,0)
+17 QUIT
IDPARA ;Get parasite stage, quantity, and comment
+1 NEW DA,DIC,DIQ,DR,PARA,STAGE
+2 IF 'SN
SET PARA=$SELECT($DATA(EXPAND):PN_";"_$PIECE(^LAB(61.2,PARAIEN,0),U),1:$PIECE(^LAB(61.2,PARAIEN,0),U))
SET ^TMP("ORM",$JOB,RPT,SS,"RPT",PARAIEN)="P"_U_PARA
QUIT
+3 SET DA=LRDFN
SET DA(63.05)=IX
SET DA(63.34)=PN
SET DA(63.35)=SN
SET DIC=63
SET DIQ="STAGE"
SET DIQ(0)="E"
SET DR=5
SET DR(63.05)=16
SET DR(63.34)=1
SET DR(63.35)=".01;1"
DO EN^DIQ1
+4 SET ^TMP("ORM",$JOB,RPT,SS,"RPT",PARAIEN,SN)=STAGE(63.35,SN,.01,"E")_U_STAGE(63.35,SN,1,"E")
+5 ;comment
+6 SET COM=0
+7 FOR
SET COM=$ORDER(^LR(LRDFN,"MI",IX,6,PN,1,SN,1,COM))
IF COM'>0
QUIT
SET ^TMP("ORM",$JOB,RPT,SS,"RPT",PARAIEN,SN,COM)=^(COM,0)
+8 QUIT
MYCO ; Get Mycology Work-up
+1 NEW DA,DIC,DIQ,DR,DA,STATUS,GMW,ISO,FUN,RMK,COM,SMEAR,MYCOIEN
+2 IF $DATA(^LR(LRDFN,"MI",IX,8))
Begin DoDot:1
+3 SET DIC=63
SET DA=LRDFN
SET DA(63.05)=IX
SET DR=5
SET DR(63.05)=19
SET DIQ="STATUS"
+4 SET DIQ(0)="E"
DO EN^DIQ1
+5 SET ^TMP("ORM",$JOB,RPT,SS)=^TMP("ORM",$JOB,RPT,SS)_U_$EXTRACT($PIECE(STATUS(63.05,IX,19,"E")," ",1),1,6)
End DoDot:1
+6 SET ISO=0
+7 FOR
SET ISO=$ORDER(^LR(LRDFN,"MI",IX,9,ISO))
IF +ISO'>0
QUIT
Begin DoDot:1
+8 SET MYCOIEN=+^LR(LRDFN,"MI",IX,9,ISO,0)
+9 DO FNGS
SET ^TMP("ORM",$JOB,RPT,SS,"RPT",MYCOIEN)="M"_U_$SELECT($DATA(EXPAND):ISO_";"_FUN,1:FUN)
+10 ;comment
+11 SET COM=0
+12 FOR
SET COM=$ORDER(^LR(LRDFN,"MI",IX,9,ISO,1,COM))
IF COM'>0
QUIT
SET ^TMP("ORM",$JOB,RPT,SS,"RPT",MYCOIEN,"COM",COM)=^(COM,0)
End DoDot:1
+13 ; Mycology smear/prep
+14 SET SMEAR=0
+15 FOR
SET SMEAR=$ORDER(^LR(LRDFN,"MI",IX,15,SMEAR))
IF SMEAR'>0
QUIT
SET ^TMP("ORM",$JOB,RPT,SS,"IMP","MYCO","SMEAR",SMEAR)=^(SMEAR,0)
+16 ; remark
+17 SET RMK=0
+18 FOR
SET RMK=$ORDER(^LR(LRDFN,"MI",IX,10,RMK))
IF +RMK'>0
QUIT
SET ^TMP("ORM",$JOB,RPT,SS,"IMP","MYCO","RMK",RMK)=^(RMK,0)
+19 QUIT
FNGS NEW QTY
+1 SET FUN=+^LR(LRDFN,"MI",IX,9,ISO,0)
SET QTY=$PIECE(^(0),U,2)
SET FUN=$PIECE(^LAB(61.2,FUN,0),U)
+2 SET FUN=FUN_U_QTY
+3 QUIT
TB ; Gets Mycobacteriology Work-up
+1 NEW DA,DIC,DIQ,DR,STATUS,GMW,ISO,MB,RMK,X,Y,COM,MY,GMTB,GMTBA,TBIEN
+2 IF $DATA(^LR(LRDFN,"MI",IX,11))
Begin DoDot:1
+3 SET DIC=63
SET DA=LRDFN
SET DA(63.05)=IX
SET DR=5
SET DR(63.05)="23;24;25"
SET DIQ="STATUS"
+4 SET DIQ(0)="E"
DO EN^DIQ1
+5 ;Status, Acid Fast Stain, Quantity
+6 SET ^TMP("ORM",$JOB,RPT,SS)=^TMP("ORM",$JOB,RPT,SS)_U_$EXTRACT($PIECE(STATUS(63.05,IX,23,"E")," ",1),1,6)
+7 SET ^TMP("ORM",$JOB,RPT,SS,"IMP","TB","ACID FAST STAIN")=STATUS(63.05,IX,24,"E")_U_STATUS(63.05,IX,25,"E")
End DoDot:1
+8 SET ISO=0
+9 FOR
SET ISO=$ORDER(^LR(LRDFN,"MI",IX,12,ISO))
IF +ISO'>0
QUIT
Begin DoDot:1
+10 SET TBIEN=+^LR(LRDFN,"MI",IX,12,ISO,0)
+11 DO MYCB
SET ^TMP("ORM",$JOB,RPT,SS,"RPT",TBIEN)="TB"_U_$SELECT($DATA(EXPAND):ISO_";"_MB,1:MB)
+12 ;comment
+13 SET COM=0
+14 FOR
SET COM=$ORDER(^LR(LRDFN,"MI",IX,12,TBIEN,1,COM))
IF COM'>0
QUIT
SET ^TMP("ORM",$JOB,RPT,SS,"RPT",TBIEN,"COM",COM)=^(COM,0)
+15 ;Susceptiblities
+16 SET GMTB=2
+17 FOR
SET GMTB=$ORDER(^LR(LRDFN,"MI",IX,12,ISO,GMTB))
IF GMTB'["2."!(GMTB="")
QUIT
Begin DoDot:2
+18 SET GMTBA=+$ORDER(^DD(63.39,"GL",GMTB,1,0))
+19 SET GMTBA=$$GET1^DID(63.39,GMTBA,"","LABEL")
+20 SET ^TMP("ORM",$JOB,RPT,SS,"RPT",TBIEN,GMTB)=GMTBA_U_$PIECE(^LR(LRDFN,"MI",IX,12,ISO,GMTB),U)
End DoDot:2
End DoDot:1
+21 ; remark
+22 SET RMK=0
+23 FOR
SET RMK=$ORDER(^LR(LRDFN,"MI",IX,13,RMK))
IF RMK=""
QUIT
SET ^TMP("ORM",$JOB,RPT,SS,"IMP","TB","RMK",RMK)=^(RMK,0)
+24 QUIT
MYCB NEW QTY
+1 SET QTY=$PIECE(^(0),U,2)
SET MB=$PIECE(^LAB(61.2,TBIEN,0),U)
+2 SET MB=MB_U_QTY
+3 QUIT
VIRO ; Gets Virology Work-up
+1 NEW BUG,DA,DIC,DIQ,DR,GMW,ISO,RMK,STATUS,VIROIEN
+2 IF $DATA(^LR(LRDFN,"MI",IX,16))
Begin DoDot:1
+3 SET DIC=63
SET DA=LRDFN
SET DA(63.05)=IX
SET DR=5
SET DR(63.05)=34
SET DIQ="STATUS"
+4 SET DIQ(0)="E"
DO EN^DIQ1
+5 SET ^TMP("ORM",$JOB,RPT,SS)=^TMP("ORM",$JOB,RPT,SS)_U_$EXTRACT($PIECE(STATUS(63.05,IX,34,"E")," ",1),1,6)
End DoDot:1
+6 SET ISO=0
+7 FOR
SET ISO=$ORDER(^LR(LRDFN,"MI",IX,17,ISO))
IF +ISO'>0
QUIT
Begin DoDot:1
+8 SET VIROIEN=+^LR(LRDFN,"MI",IX,17,ISO,0)
+9 DO PHAGE
SET ^TMP("ORM",$JOB,RPT,SS,"RPT",VIROIEN)="V"_U_$SELECT($DATA(EXPAND):ISO_";"_BUG,1:BUG)
End DoDot:1
+10 SET RMK=0
+11 FOR
SET RMK=$ORDER(^LR(LRDFN,"MI",IX,18,RMK))
IF RMK=""
QUIT
SET ^TMP("ORM",$JOB,RPT,SS,"IMP","VIRO","RMK",RMK)=^(RMK,0)
+12 QUIT
PHAGE SET BUG=$PIECE(^LAB(61.2,VIROIEN,0),U)
+1 QUIT
